RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 EFNA3P52797 238 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 FOXA1P55317 472 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 OR4D2P58180 307 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 CCNYL2Q5T2Q4 361 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 LANCL3Q6ZV70 420 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 CLYBLQ8N0X4 340 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 GALNT16Q8N428 558 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 EXD3Q8N9H8 876 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 SLC25A23Q9BV35 468 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 WDR41Q9HAD4 459 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 ZNF160Q9HCG1 818 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 CCDC88CQ9P219 2028 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 LOC400499M0QZD8 3231 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 GCN1Q92616 2671 aaKnown RBP21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 A6NL46 340 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 SNUPNO95149 360 aaKnown RBP21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 SERPINE1P05121 402 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 MAOAP21397 527 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 GRK2P25098 689 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 ITGA3P26006 1051 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 SERPINB3P29508 390 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 HTR6P50406 440 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 TBL3Q12788 808 aaKnown RBP21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 PCOLCEQ15113 449 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 CHI3L2Q15782 390 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 IMPG1Q17R60 797 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 SPIN4Q56A73 249 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 SFT2D3Q587I9 215 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 MRM1Q6IN84 353 aaKnown RBP21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 PCSK4Q6UW60 755 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 COMMD6Q7Z4G1 85 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 TRIM46Q7Z4K8 759 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 SCUBE1Q8IWY4 988 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 PARP9Q8IXQ6 854 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 KBTBD2Q8IY47 623 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 OR6Y1Q8NGX8 325 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 CHTF18Q8WVB6 975 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 TANKQ92844 425 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 TSLPQ969D9 159 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 ABHD17AQ96GS6 310 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 ATP6V1G3Q96LB4 118 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 CSF3RQ99062 836 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 LPAR4Q99677 370 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 MESP1Q9BRJ9 268 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 ACPTQ9BZG2 426 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 ACBD3Q9H3P7 528 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 TRAF6Q9Y4K3 522 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 ASB4Q9Y574 426 aa21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 PCDHGA9Q9Y5G4 932 aaKnown RBP21.69■■□□□ 1.06
SMARCB1-205ENST00000417137 SMG1Q96Q15 3661 aaKnown RBP21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 IGKV3D-11A0A0A0MRZ8 115 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 TMEM114B3SHH9 223 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 SLC28A1O00337 649 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 PROM1O43490 865 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 CEACAM4O75871 244 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 CHRNGP07510 517 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 PPP2R1BP30154 601 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 MAPK12P53778 367 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 ACSM2AQ08AH3 577 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 STX4Q12846 297 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 BIKQ13323 160 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 LY6DQ14210 128 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 SPDYAQ5MJ70 313 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 ACSM2BQ68CK6 577 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 CLEC6AQ6EIG7 209 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 SCIMPQ6UWF3 145 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 C1orf52Q8N6N3 182 aaKnown RBP21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 C9orf43Q8TAL5 461 aaPredicted RBP21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 SLC39A7Q92504 469 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 ARL8AQ96BM9 186 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 RPF2Q9H7B2 306 aaKnown RBP21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 NECTIN3Q9NQS3 549 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 GPR83Q9NYM4 423 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 ATG4BQ9Y4P1 393 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 PCDHGB7Q9Y5F8 929 aa21.68■■□□□ 1.06
SMARCB1-205ENST00000417137 TCRBV16S1A1N1A0A5B0 115 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 TMPRSS11DO60235 418 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 HSPA4LO95757 839 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 GBAP04062 536 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 ALPPP05187 535 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 CHN1P15882 459 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 TPP2P29144 1249 aaPredicted RBP21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 HNRNPH2P55795 449 aaKnown RBP21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 HMGCS1Q01581 520 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 TNFRSF17Q02223 184 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 SERTAD2Q14140 314 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 MYBPC3Q14896 1274 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 EXT1Q16394 746 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 TCTN3Q6NUS6 607 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 RIPOR1Q6ZS17 1223 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 TMEM52Q8NDY8 209 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 THOC3Q96J01 351 aaKnown RBP21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 IMMP1LQ96LU5 166 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 BBC3Q96PG8 261 aaPredicted RBP21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 SH3GL2Q99962 352 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 LHPPQ9H008 270 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 SLC25A18Q9H1K4 315 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 TNFRSF12AQ9NP84 129 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 FIS1Q9Y3D6 152 aa21.67■■□□□ 1.06
SMARCB1-205ENST00000417137 IGHV3-20A0A0C4DH32 117 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms