RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 INTS9Q9NV88 658 aaKnown RBP4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 RNF186Q9NXI6 227 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 EXTL2Q9UBQ6 330 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 COPS7AQ9UBW8 275 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZCCHC6Q5VYS8 1495 aaKnown RBP4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZMYM6O95789 1325 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 A0A087WUV0 522 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 P2RX6O15547 441 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 GRID2O43424 1007 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 LANCL1O43813 399 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 CYTIPO60759 359 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 SYNGR4O95473 234 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 TSPY4P0CV99 314 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 TSPY10P0CW01 314 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 MARK3P27448 753 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 SLC1A3P43003 542 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 TRPC1P48995 793 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 NUMBP49757 651 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 HSPA14Q0VDF9 509 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 SNX1Q13596 522 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 HEPACAMQ14CZ8 416 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 OR1C1Q15619 314 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 CARTPTQ16568 116 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 TAF3Q5VWG9 929 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 BCORP1Q8N888 145 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 KBTBD8Q8NFY9 601 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 OR13A1Q8NGR1 328 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 ARHGAP45Q92619 1136 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 P3H4Q92791 437 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 CASP10Q92851 521 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 SENP5Q96HI0 755 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 CFAP53Q96M91 514 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 TXN2Q99757 166 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 AGPAT1Q99943 283 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 CCDC94Q9BW85 323 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 FAM49AQ9H0Q0 323 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 MMP28Q9H239 520 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 ROPN1Q9HAT0 212 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 TMOD2Q9NZR1 351 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 MDFICQ9P1T7 246 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 SUN2Q9UH99 717 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 RABL2BQ9UNT1 228 aa4.32□□□□□ -1.72
HMGB1P13-201ENST00000406019 TRBV4-1A0A0J9YWV2 114 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 MSGN1A6NI15 193 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 ARPC1BO15143 372 aaKnown RBP4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 EXTL3O43909 919 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 SCGB2A1O75556 95 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 NADKO95544 446 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 EDN1P05305 212 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 APRTP07741 180 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 SP1P08047 785 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 GSTA2P09210 222 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 TPBGLP0DKB5 382 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 RALAP11233 206 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 ITGA3P26006 1051 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 OR3A2P47893 321 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 SLC6A8P48029 635 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 NLRP11P59045 1033 aaKnown RBP4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 DCDC1P59894 354 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 MECOMQ03112 1051 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 CNTN1Q12860 1018 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 CCDC6Q16204 474 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZNF74Q16587 644 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 DUSP5Q16690 384 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZNF528Q3MIS6 628 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 LRRC37A5PQ49AS3 106 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 FGD3Q5JSP0 725 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 LDLRAP1Q5SW96 308 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 GFI1BQ5VTD9 330 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 TRIM65Q6PJ69 517 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 SLC25A47Q6Q0C1 308 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 TMEM64Q6YI46 380 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 YRDCQ86U90 279 aaKnown RBP4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 LRRC17Q8N6Y2 441 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 CCDC185Q8N715 623 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 DMBX1Q8NFW5 382 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 OR6M1Q8NGM8 313 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 OR13C5Q8NGS8 318 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 CHPT1Q8WUD6 406 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 SELENOMQ8WWX9 145 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 DYRK2Q92630 601 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 CD101Q93033 1021 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 TMEM143Q96AN5 459 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 JPH2Q9BR39 696 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 MTIF3Q9H2K0 278 aaKnown RBP4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 FNDC4Q9H6D8 234 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 SIX2Q9NPC8 291 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 RBM28Q9NW13 759 aaKnown RBP4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 PLEK2Q9NYT0 353 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 HACD3Q9P035 362 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 ATXN10Q9UBB4 475 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 POLKQ9UBT6 870 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 PPP2R2CQ9Y2T4 447 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 OR1A2Q9Y585 309 aa4.31□□□□□ -1.72
HMGB1P13-201ENST00000406019 FGD5Q6ZNL6 1462 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 PTPRUQ92729 1446 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 A0A087WZ39 114 aa4.3□□□□□ -1.72
HMGB1P13-201ENST00000406019 NKX6-3A6NJ46 265 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms