RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ATP1B2P14415 290 aaPredicted RBP12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 RPS2P15880 293 aaKnown RBP12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 IVDP26440 423 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 ACTA2P62736 377 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 ACTG2P63267 376 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 RAB41Q5JT25 222 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZNF529Q6P280 563 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 ENPP6Q6UWR7 440 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 BEST4Q8NFU0 473 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 CLEC4DQ8WXI8 215 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 NSMAFQ92636 917 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TMEM41AQ96HV5 264 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TWNKQ96RR1 684 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 CCM2Q9BSQ5 444 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 MMP28Q9H239 520 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 PCDHB14Q9Y5E9 798 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 NAP1L6A6NFF2 107 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 GRIN3BO60391 1043 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 EPOP01588 193 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 LYSMD3Q7Z3D4 306 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 SCGB1C1Q8TD33 95 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 GAL3ST4Q96RP7 486 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC29A1Q99808 456 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 RIPK3Q9Y572 518 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TLL1O43897 1013 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TFP02787 698 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 SFTPBP07988 381 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 BCKDHAP12694 445 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 RPS13P62277 151 aaKnown RBP12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 SIX1Q15475 284 aaPredicted RBP12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 MYOCQ99972 504 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TMEM39AQ9NV64 488 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 PTTG3PQ9NZH4 202 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 KLHL9Q9P2J3 617 aa12.24□□□□□ -0.45
SYNCRIP-201ENST00000355238 TVP23AA6NH52 213 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ANKRD66B4E2M5 251 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 SSX5O60225 188 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 FMO6PO60774 539 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 UCHL1P09936 223 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 AGTR2P50052 363 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 TMEM205Q6UW68 189 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 GSG1LQ6UXU4 331 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ACBD4Q8NC06 268 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC22A18Q96BI1 424 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 MCHR1Q99705 422 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 C7orf50Q9BRJ6 194 aaKnown RBP12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ACSL6Q9UKU0 697 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 MSCO60682 206 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 CHRNB1P11230 501 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ERVK-25P63136 954 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 CHAF1BQ13112 559 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 RCAN2Q14206 197 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 LIPJQ5W064 366 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 MAP1SQ66K74 1059 aaPredicted RBP12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ABHD13Q7L211 337 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 C3orf58Q8NDZ4 430 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 LRR1Q96L50 414 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 VRTNQ9H8Y1 702 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 DEC1Q9P2X7 70 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 MYOM1P52179 1685 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC22A31A6NKX4 558 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ATE1O95260 518 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ADAP00813 363 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 FCER2P06734 321 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ITGA5P08648 1049 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLURP2P0DP57 97 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 NR2C1P13056 603 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 CERS1P27544 350 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC5A2P31639 672 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 TMEM135Q86UB9 458 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 RGL4Q8IZJ4 473 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ACBD7Q8N6N7 88 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 FBXO27Q8NI29 283 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 METTL21AQ8WXB1 218 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ATG5Q9H1Y0 275 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 NT5DC2Q9H857 520 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ADM5C9JUS6 153 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 SOX30O94993 753 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 RETP07949 1114 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 SPATA31D3P0C874 917 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 HOXD13P35453 343 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 RPS5P46782 204 aaKnown RBP12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 NAPRTQ6XQN6 538 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 SPATA31D4Q6ZUB0 917 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC16A9Q7RTY1 509 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 GPR142Q7Z601 462 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZBTB20Q9HC78 741 aaPredicted RBP12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 KLRG2A4D1S0 409 aaPredicted RBP12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ADAMTS3O15072 1205 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ERI3O43414 337 aaKnown RBP12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 HCKP08631 526 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 ALAS2P22557 587 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 PSMD8P48556 350 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 MAP2K5Q13163 448 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 SERINC3Q13530 473 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 PRAMEF19Q5SWL8 479 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC35F1Q5T1Q4 408 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC25A36Q96CQ1 311 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR2AG1Q9H205 316 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 SRMSQ9H3Y6 488 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms