RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 SLC43A1O75387 559 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 RFPL3O75679 317 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 GASTP01350 101 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 ITPKAP23677 461 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 DDX39BQ13838 428 aaKnown RBP14.32□□□□□ -0.12
XRCC1-201ENST00000262887 MACC1Q6ZN28 852 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 UBE2R2Q712K3 238 aaPredicted RBP14.32□□□□□ -0.12
XRCC1-201ENST00000262887 PROKR2Q8NFJ6 384 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 AP3S1Q92572 193 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 AKAP1Q92667 903 aaKnown RBP eCLIP14.32□□□□□ -0.12
XRCC1-201ENST00000262887 FCRL1Q96LA6 429 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 MAGEB10Q96LZ2 347 aaPredicted RBP14.32□□□□□ -0.12
XRCC1-201ENST00000262887 SAMD11Q96NU1 681 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 NELL2Q99435 816 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 PIP5K1AQ99755 562 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 MARVELD1Q9BSK0 173 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 GALNT9Q9HCQ5 603 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 PRM3Q9NNZ6 103 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 COQ3Q9NZJ6 369 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 SLC22A14Q9Y267 594 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 SNX11Q9Y5W9 270 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 I3L521 148 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 FAM157BP0CG42 384 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 TNNI3P19429 210 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 AOAHP28039 575 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 SDC2P34741 201 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 FEN1P39748 380 aaKnown RBP14.32□□□□□ -0.12
XRCC1-201ENST00000262887 PER3P56645 1201 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 SRP54P61011 504 aaKnown RBP14.32□□□□□ -0.12
XRCC1-201ENST00000262887 ACSM2AQ08AH3 577 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 ACSM2BQ68CK6 577 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 ABI3BPQ7Z7G0 1075 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 GPR65Q8IYL9 337 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 TAGAPQ8N103 731 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 OR8H3Q8N146 312 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 SLC37A3Q8NCC5 494 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 TMEM203Q969S6 136 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 FAM193BQ96PV7 902 aaPredicted RBP14.32□□□□□ -0.12
XRCC1-201ENST00000262887 ZFYVE1Q9HBF4 777 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 IL26Q9NPH9 171 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 VPS29Q9UBQ0 182 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 BTNL2Q9UIR0 455 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 AUP1Q9Y679 476 aa14.32□□□□□ -0.12
XRCC1-201ENST00000262887 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.31□□□□□ -0.12
XRCC1-201ENST00000262887 PRAMEF4O60810 478 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 CLDN11O75508 207 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 HIST1H2AGP0C0S8 130 aaPredicted RBP14.31□□□□□ -0.12
XRCC1-201ENST00000262887 ATF6P18850 670 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 HIST1H2ADP20671 130 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 SNRPGP62308 76 aaKnown RBP14.31□□□□□ -0.12
XRCC1-201ENST00000262887 ABATP80404 500 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 ARF5P84085 180 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 CHIT1Q13231 466 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 ZNF177Q13360 481 aaPredicted RBP14.31□□□□□ -0.12
XRCC1-201ENST00000262887 NFE2L1Q14494 772 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 COX20Q5RI15 118 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 PRAMEF9Q5VWM5 478 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 OR4A15Q8NGL6 344 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 MTERF3Q96E29 417 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 HIST1H2AHQ96KK5 128 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 MTERF1Q99551 399 aaKnown RBP14.31□□□□□ -0.12
XRCC1-201ENST00000262887 HIST1H2AJQ99878 128 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 H2AFJQ9BTM1 129 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 NMNAT1Q9HAN9 279 aaPredicted RBP14.31□□□□□ -0.12
XRCC1-201ENST00000262887 KCTD5Q9NXV2 234 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 RHCGQ9UBD6 479 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 ELF5Q9UKW6 265 aaPredicted RBP14.31□□□□□ -0.12
XRCC1-201ENST00000262887 RUVBL1Q9Y265 456 aaKnown RBP14.31□□□□□ -0.12
XRCC1-201ENST00000262887 PCDHGB7Q9Y5F8 929 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 GABRR3A8MPY1 467 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 PITPNM1O00562 1244 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 CHRM5P08912 532 aaPredicted RBP14.31□□□□□ -0.12
XRCC1-201ENST00000262887 LIMS1P48059 325 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 SCARB2Q14108 478 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 LEXMQ3ZCV2 418 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 ANKRD54Q6NXT1 300 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 PAQR6Q6TCH4 344 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 NFKBIDQ8NI38 313 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 GEMIN6Q8WXD5 167 aaKnown RBP14.31□□□□□ -0.12
XRCC1-201ENST00000262887 KCTD7Q96MP8 289 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 ZNF282Q9UDV7 671 aaPredicted RBP14.31□□□□□ -0.12
XRCC1-201ENST00000262887 MALT1Q9UDY8 824 aa14.31□□□□□ -0.12
XRCC1-201ENST00000262887 RPL36Q9Y3U8 105 aaKnown RBP14.31□□□□□ -0.12
XRCC1-201ENST00000262887 DNMT3AQ9Y6K1 912 aaPredicted RBP14.31□□□□□ -0.12
XRCC1-201ENST00000262887 TDRD15B5MCY1 1934 aaKnown RBP14.3□□□□□ -0.12
XRCC1-201ENST00000262887 ZNF623O75123 536 aa14.3□□□□□ -0.12
XRCC1-201ENST00000262887 HOXC8P31273 242 aa14.3□□□□□ -0.12
XRCC1-201ENST00000262887 CD52P31358 61 aa14.3□□□□□ -0.12
XRCC1-201ENST00000262887 XCR1P46094 333 aa14.3□□□□□ -0.12
XRCC1-201ENST00000262887 SGSHP51688 502 aa14.3□□□□□ -0.12
XRCC1-201ENST00000262887 PPP3R1P63098 170 aa14.3□□□□□ -0.12
XRCC1-201ENST00000262887 PURAQ00577 322 aaKnown RBP14.3□□□□□ -0.12
XRCC1-201ENST00000262887 RGS1Q08116 209 aa14.3□□□□□ -0.12
XRCC1-201ENST00000262887 CDKL4Q5MAI5 379 aa14.3□□□□□ -0.12
XRCC1-201ENST00000262887 RNF219Q5W0B1 726 aaPredicted RBP14.3□□□□□ -0.12
XRCC1-201ENST00000262887 TEX261Q6UWH6 196 aa14.3□□□□□ -0.12
XRCC1-201ENST00000262887 PDZD3Q86UT5 571 aa14.3□□□□□ -0.12
XRCC1-201ENST00000262887 LINC00469Q8N7U9 141 aa14.3□□□□□ -0.12
XRCC1-201ENST00000262887 TMEM145Q8NBT3 493 aa14.3□□□□□ -0.12
XRCC1-201ENST00000262887 OR10Z1Q8NGY1 313 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms