RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 NCKAP1Q9Y2A7 1128 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 RRN3P2A6NIE6 340 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 TLR4O00206 839 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 CNMDO75829 334 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 GADD45GO95257 159 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 IL1AP01583 271 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 LHCGRP22888 699 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 MAPK1P28482 360 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 CRISP1P54107 249 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 ZNF280AP59817 542 aaPredicted RBP14.54□□□□□ -0.08
PMS1-221ENST00000624204 SELENOWP63302 87 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 FRMPD2BQ6IN97 320 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 TAPT1Q6NXT6 567 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 C11orf65Q8NCR3 313 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 CEP76Q8TAP6 659 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.54□□□□□ -0.08
PMS1-221ENST00000624204 TRIB3Q96RU7 358 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 ATG10Q9H0Y0 220 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 NDUFB11Q9NX14 153 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 ASIC5Q9NY37 505 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 DNAJC25-GNG10A0A024R161 153 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 SYNDIG1LA6NDD5 238 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 HCN1O60741 890 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 PRAMEF11O60813 436 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 GRK4P32298 578 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 VEZF1Q14119 521 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 ATAT1Q5SQI0 421 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 MTFR2Q6P444 385 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 KIAA1324Q6UXG2 1013 aaKnown RBP14.54□□□□□ -0.08
PMS1-221ENST00000624204 ZNF782Q6ZMW2 699 aaPredicted RBP14.54□□□□□ -0.08
PMS1-221ENST00000624204 KRT74Q7RTS7 529 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 FAM46DQ8NEK8 389 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 MSLNLQ96KJ4 702 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 ARL15Q9NXU5 204 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 SPATA2Q9UM82 520 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 PRR23AA6NEV1 266 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 GTPBP1O00178 669 aaKnown RBP14.53□□□□□ -0.08
PMS1-221ENST00000624204 SLC9A3R1O14745 358 aaPredicted RBP14.53□□□□□ -0.08
PMS1-221ENST00000624204 GASTP01350 101 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 TEKQ02763 1124 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 HSDL2Q6YN16 418 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 PRSS42Q7Z5A4 293 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 FAM9CQ8IZT9 166 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 SYNPOQ8N3V7 929 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 BEST4Q8NFU0 473 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 AP3S1Q92572 193 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 AP2M1Q96CW1 435 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 MYEOVQ96EZ4 313 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 ART5Q96L15 291 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 KATNB1Q9BVA0 655 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 SLC29A3Q9BZD2 475 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 SLC28A3Q9HAS3 691 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 RBPJLQ9UBG7 517 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 OARD1Q9Y530 152 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 YY2O15391 372 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 SLC43A1O75387 559 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 ALDH1A1P00352 501 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 RAF1P04049 648 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 HRGP04196 525 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 ODC1P11926 461 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 PRPS1L1P21108 318 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 CTBP2P56545 445 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 BCL2L1Q07817 233 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 C2orf80Q0P641 193 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 ZSWIM7Q19AV6 140 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 KLHL22Q53GT1 634 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 C16orf59Q7L2K0 433 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 TCEANCQ8N8B7 351 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 OR6J1Q8NGC5 347 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 TOE1Q96GM8 510 aaKnown RBP14.53□□□□□ -0.08
PMS1-221ENST00000624204 MARVELD1Q9BSK0 173 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 NTMT1Q9BV86 223 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 C2orf49Q9BVC5 232 aaPredicted RBP14.53□□□□□ -0.08
PMS1-221ENST00000624204 NKIRAS2Q9NYR9 191 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 ACSL6Q9UKU0 697 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 TLR6Q9Y2C9 796 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 MRPS7Q9Y2R9 242 aaKnown RBP14.53□□□□□ -0.08
PMS1-221ENST00000624204 PIPSLA2A3N6 862 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 ETFAP13804 333 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 CLCN4P51793 760 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 EXOSC2Q13868 293 aaKnown RBP14.53□□□□□ -0.08
PMS1-221ENST00000624204 C10orf120Q5SQS8 335 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 ADGRD2Q7Z7M1 963 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 CLDN22Q8N7P3 220 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 DUSP18Q8NEJ0 188 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 PKP4Q99569 1192 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 MAPKAP1Q9BPZ7 522 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 TSSK6Q9BXA6 273 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 GPR63Q9BZJ6 419 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 FNIP2Q9P278 1114 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 LSM2Q9Y333 95 aaKnown RBP14.53□□□□□ -0.08
PMS1-221ENST00000624204 PCDHB11Q9Y5F2 797 aa14.53□□□□□ -0.08
PMS1-221ENST00000624204 MPZL2O60487 215 aa14.52□□□□□ -0.08
PMS1-221ENST00000624204 ALPIP09923 528 aa14.52□□□□□ -0.08
PMS1-221ENST00000624204 SMIM10L2AP0DMW4 78 aa14.52□□□□□ -0.08
PMS1-221ENST00000624204 SMIM10L2BP0DMW5 78 aa14.52□□□□□ -0.08
PMS1-221ENST00000624204 ITGB7P26010 798 aa14.52□□□□□ -0.08
PMS1-221ENST00000624204 PXNP49023 591 aaPredicted RBP14.52□□□□□ -0.08
PMS1-221ENST00000624204 ALDH9A1P49189 494 aa14.52□□□□□ -0.08
PMS1-221ENST00000624204 ZNF91Q05481 1191 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms