RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 NOL11Q9H8H0 719 aaKnown RBP25.51■■□□□ 1.67
SMAD4-213ENST00000591914 PRTFDC1Q9NRG1 225 aa25.51■■□□□ 1.67
SMAD4-213ENST00000591914 COL12A1Q99715 3063 aa25.51■■□□□ 1.67
SMAD4-213ENST00000591914 OR5H15A6NDH6 313 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 TGFBR3LH3BV60 316 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 RTCAO00442 366 aaKnown RBP25.5■■□□□ 1.67
SMAD4-213ENST00000591914 SH3BGRLO75368 114 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 F10P00742 488 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 HIST1H1TP22492 207 aaPredicted RBP25.5■■□□□ 1.67
SMAD4-213ENST00000591914 TNFRSF8P28908 595 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 SRSF1Q07955 248 aaKnown RBP eCLIP25.5■■□□□ 1.67
SMAD4-213ENST00000591914 DDX39BQ13838 428 aaKnown RBP25.5■■□□□ 1.67
SMAD4-213ENST00000591914 RCN2Q14257 317 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 FCRLBQ6BAA4 426 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 LCA5Q86VQ0 697 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 CRLF3Q8IUI8 442 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 CNPY4Q8N129 248 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 REPS1Q96D71 796 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 MTERF1Q99551 399 aaKnown RBP25.5■■□□□ 1.67
SMAD4-213ENST00000591914 NPAS2Q99743 824 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 OR51B5Q9H339 312 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 PRM3Q9NNZ6 103 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 PSMC3IPQ9P2W1 217 aaPredicted RBP25.5■■□□□ 1.67
SMAD4-213ENST00000591914 RNF11Q9Y3C5 154 aa25.5■■□□□ 1.67
SMAD4-213ENST00000591914 IQANK1A0A1B0GTG1 560 aa25.49■■□□□ 1.67
SMAD4-213ENST00000591914 CLDN9O95484 217 aa25.49■■□□□ 1.67
SMAD4-213ENST00000591914 SLC13A2Q13183 592 aa25.49■■□□□ 1.67
SMAD4-213ENST00000591914 TERF2Q15554 542 aa25.49■■□□□ 1.67
SMAD4-213ENST00000591914 CPSF6Q16630 551 aaKnown RBP eCLIP25.49■■□□□ 1.67
SMAD4-213ENST00000591914 AP5B1Q2VPB7 878 aa25.49■■□□□ 1.67
SMAD4-213ENST00000591914 BEST3Q8N1M1 668 aa25.49■■□□□ 1.67
SMAD4-213ENST00000591914 SLC5A8Q8N695 610 aa25.49■■□□□ 1.67
SMAD4-213ENST00000591914 OR52B6Q8NGF0 335 aa25.49■■□□□ 1.67
SMAD4-213ENST00000591914 WDR20Q8TBZ3 569 aa25.49■■□□□ 1.67
SMAD4-213ENST00000591914 NTMT1Q9BV86 223 aa25.49■■□□□ 1.67
SMAD4-213ENST00000591914 ZBTB26Q9HCK0 441 aa25.49■■□□□ 1.67
SMAD4-213ENST00000591914 AGPAT4Q9NRZ5 378 aa25.49■■□□□ 1.67
SMAD4-213ENST00000591914 LRRK2Q5S007 2527 aa25.48■■□□□ 1.67
SMAD4-213ENST00000591914 SAP18O00422 153 aaKnown RBP25.48■■□□□ 1.67
SMAD4-213ENST00000591914 SSR2P43308 183 aa25.48■■□□□ 1.67
SMAD4-213ENST00000591914 ARFIP1P53367 373 aa25.48■■□□□ 1.67
SMAD4-213ENST00000591914 TAS2R50P59544 299 aa25.48■■□□□ 1.67
SMAD4-213ENST00000591914 MRPL49Q13405 166 aaKnown RBP25.48■■□□□ 1.67
SMAD4-213ENST00000591914 UBAP2LQ14157 1087 aaKnown RBP25.48■■□□□ 1.67
SMAD4-213ENST00000591914 MEP1AQ16819 746 aa25.48■■□□□ 1.67
SMAD4-213ENST00000591914 OR4C11Q6IEV9 310 aa25.48■■□□□ 1.67
SMAD4-213ENST00000591914 LGI4Q8N135 537 aa25.48■■□□□ 1.67
SMAD4-213ENST00000591914 KIF2BQ8N4N8 673 aa25.48■■□□□ 1.67
SMAD4-213ENST00000591914 GRHL3Q8TE85 626 aa25.48■■□□□ 1.67
SMAD4-213ENST00000591914 RGMAQ96B86 450 aa25.48■■□□□ 1.67
SMAD4-213ENST00000591914 NSUN5Q96P11 429 aaKnown RBP25.48■■□□□ 1.67
SMAD4-213ENST00000591914 MAPKAP1Q9BPZ7 522 aa25.48■■□□□ 1.67
SMAD4-213ENST00000591914 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP25.48■■□□□ 1.675e-7■■□□□ 12.5
SMAD4-213ENST00000591914 PSD3Q9NYI0 1048 aa25.48■■□□□ 1.67
SMAD4-213ENST00000591914 SYNDIG1LA6NDD5 238 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 A8MT66 165 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 PLPP1O14494 284 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 MAN1A2O60476 641 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 CTNSO60931 367 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 CBX6O95503 412 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 RPS17P08708 135 aaKnown RBP25.47■■□□□ 1.67
SMAD4-213ENST00000591914 PTX3P26022 381 aaPredicted RBP25.47■■□□□ 1.67
SMAD4-213ENST00000591914 CCNG1P51959 295 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 RPS13P62277 151 aaKnown RBP25.47■■□□□ 1.67
SMAD4-213ENST00000591914 PHEXP78562 749 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 TRAF3Q13114 568 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 NR6A1Q15406 480 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 ZRSR2Q15696 482 aaKnown RBP25.47■■□□□ 1.67
SMAD4-213ENST00000591914 INAQ16352 499 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 FAM26EQ8N5C1 309 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 ACMSDQ8TDX5 336 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 MZB1Q8WU39 189 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.47■■□□□ 1.67
SMAD4-213ENST00000591914 ATP6V1E2Q96A05 226 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 CDK15Q96Q40 435 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 CCDC77Q9BR77 488 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 CENPKQ9BS16 269 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 C1QTNF3Q9BXJ4 246 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 TMEM216Q9P0N5 145 aa25.47■■□□□ 1.67
SMAD4-213ENST00000591914 PPIEQ9UNP9 301 aaKnown RBP25.47■■□□□ 1.67
SMAD4-213ENST00000591914 SETXQ7Z333 2677 aaKnown RBP25.46■■□□□ 1.67
SMAD4-213ENST00000591914 USP9XQ93008 2570 aaPredicted RBP25.46■■□□□ 1.67
SMAD4-213ENST00000591914 A8MUA0 341 aa25.46■■□□□ 1.67
SMAD4-213ENST00000591914 FOXE1O00358 373 aaPredicted RBP25.46■■□□□ 1.67
SMAD4-213ENST00000591914 MYO1DO94832 1006 aa25.46■■□□□ 1.67
SMAD4-213ENST00000591914 PPP2R1BP30154 601 aa25.46■■□□□ 1.67
SMAD4-213ENST00000591914 RAP1GDS1P52306 607 aa25.46■■□□□ 1.67
SMAD4-213ENST00000591914 CUL3Q13618 768 aa25.46■■□□□ 1.67
SMAD4-213ENST00000591914 APCDD1LQ8NCL9 501 aa25.46■■□□□ 1.67
SMAD4-213ENST00000591914 B3GNT7Q8NFL0 401 aa25.46■■□□□ 1.67
SMAD4-213ENST00000591914 SORBS1Q9BX66 1292 aaKnown RBP25.46■■□□□ 1.67
SMAD4-213ENST00000591914 ABI3Q9P2A4 366 aa25.46■■□□□ 1.67
SMAD4-213ENST00000591914 PPT2Q9UMR5 302 aa25.46■■□□□ 1.67
SMAD4-213ENST00000591914 ESPL1Q14674 2120 aa25.45■■□□□ 1.66
SMAD4-213ENST00000591914 BLACEA4D250 179 aa25.45■■□□□ 1.66
SMAD4-213ENST00000591914 PRAMEF2O60811 474 aa25.45■■□□□ 1.66
SMAD4-213ENST00000591914 TUBA3CQ13748 450 aa25.45■■□□□ 1.66
SMAD4-213ENST00000591914 TUBA3EQ6PEY2 450 aa25.45■■□□□ 1.66
SMAD4-213ENST00000591914 CLNKQ7Z7G1 428 aa25.45■■□□□ 1.66
SMAD4-213ENST00000591914 ARMC10Q8N2F6 343 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms