RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 GRK5P34947 590 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 DGKGP49619 791 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 CLCNKAP51800 687 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 ZNF763Q0D2J5 394 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 LASP1Q14847 261 aaKnown RBP13.07□□□□□ -0.32
NDEL1-204ENST00000578172 ERICH5Q6P6B1 374 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 SMARCD3Q6STE5 483 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 FAM120CQ9NX05 1096 aaKnown RBP13.07□□□□□ -0.32
NDEL1-204ENST00000578172 NDUFAF4Q9P032 175 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 IL36AQ9UHA7 158 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 BACE2Q9Y5Z0 518 aa13.07□□□□□ -0.32
NDEL1-204ENST00000578172 VWA8A3KMH1 1905 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 PIPSLA2A3N6 862 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 NTN1O95631 604 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 RPLP0P05388 317 aaKnown RBP13.06□□□□□ -0.32
NDEL1-204ENST00000578172 OR12D1P0DN82 309 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 CD40LGP29965 261 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 AP1S2P56377 157 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 ANXA8L1Q5VT79 327 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 TMIGD1Q6UXZ0 262 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 ANKRD13BQ86YJ7 626 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 S100ZQ8WXG8 99 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 FERD3LQ96RJ6 166 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 SLC6A16Q9GZN6 736 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 ANGPT4Q9Y264 503 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 PCDHGA6Q9Y5G7 932 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 PRUNE2Q8WUY3 3088 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 TRBV4-1A0A0J9YWV2 114 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 ZW10O43264 779 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 ABLIM3O94929 683 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 RHOP08100 348 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 TIMP2P16035 220 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 IDSP22304 550 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 AVPR1BP47901 424 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 ERVFC1P60507 584 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 PTGES3Q15185 160 aaKnown RBP13.06□□□□□ -0.32
NDEL1-204ENST00000578172 C10orf62Q5T681 223 aaPredicted RBP13.06□□□□□ -0.32
NDEL1-204ENST00000578172 DESI1Q6ICB0 168 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 CBLL1Q75N03 491 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 SLC39A11Q8N1S5 342 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 SLC38A4Q969I6 547 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 CCDC115Q96NT0 180 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 NECTIN4Q96NY8 510 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 MGLLQ99685 303 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 GPN2Q9H9Y4 310 aaPredicted RBP13.06□□□□□ -0.32
NDEL1-204ENST00000578172 TBC1D17Q9HA65 648 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 INIPQ9NRY2 104 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 ZCCHC3Q9NUD5 404 aaKnown RBP13.06□□□□□ -0.32
NDEL1-204ENST00000578172 DKK3Q9UBP4 350 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 ERVW-1Q9UQF0 538 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 WBP4O75554 376 aaKnown RBP13.06□□□□□ -0.32
NDEL1-204ENST00000578172 PAK4O96013 591 aaPredicted RBP13.06□□□□□ -0.32
NDEL1-204ENST00000578172 ALOX5P09917 674 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 EPCAMP16422 314 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 IL12RB1P42701 662 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 WNT3P56703 355 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 DSTNP60981 165 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 RAB33AQ14088 237 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 TMEM215Q68D42 235 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 C17orf64Q86WR6 236 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 FKBP10Q96AY3 582 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 GFM1Q96RP9 751 aaKnown RBP13.06□□□□□ -0.32
NDEL1-204ENST00000578172 POLR2J3Q9H1A7 115 aaKnown RBP13.06□□□□□ -0.32
NDEL1-204ENST00000578172 REEP4Q9H6H4 257 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 ELAC1Q9H777 363 aaKnown RBP13.06□□□□□ -0.32
NDEL1-204ENST00000578172 SPHK2Q9NRA0 654 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 COQ3Q9NZJ6 369 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 COMMD3Q9UBI1 195 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 ZNF221Q9UK13 617 aa13.06□□□□□ -0.32
NDEL1-204ENST00000578172 BRWD1Q9NSI6 2320 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 TMCC2O75069 709 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 SEMA3DO95025 777 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 GASTP01350 101 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 SPNP16150 400 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 ASMTP46597 345 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 SLC6A11P48066 632 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 RPS7P62081 194 aaKnown RBP13.05□□□□□ -0.32
NDEL1-204ENST00000578172 SNAPC1Q16533 368 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 KDM4DQ6B0I6 523 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 PARS2Q7L3T8 475 aaKnown RBP13.05□□□□□ -0.32
NDEL1-204ENST00000578172 DGLUCYQ7Z3D6 616 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 TSPYL5Q86VY4 417 aaPredicted RBP13.05□□□□□ -0.32
NDEL1-204ENST00000578172 SUN5Q8TC36 379 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 BTN2A2Q8WVV5 523 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 FZD3Q9NPG1 666 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 CDH7Q9ULB5 785 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 PTPRDP23468 1912 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 ZNF24P17028 368 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 CST5P28325 142 aaPredicted RBP13.05□□□□□ -0.32
NDEL1-204ENST00000578172 NRIP1P48552 1158 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 SEC13P55735 322 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 DCST1Q5T197 706 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 STEAP3Q658P3 488 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 CCBE1Q6UXH8 406 aaPredicted RBP13.05□□□□□ -0.32
NDEL1-204ENST00000578172 ARMC8Q8IUR7 673 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 CHPFQ8IZ52 775 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 C16orf78Q8WTQ4 265 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 CHPT1Q8WUD6 406 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 TFGQ92734 400 aaPredicted RBP13.05□□□□□ -0.32
NDEL1-204ENST00000578172 CCNB1IP1Q9NPC3 277 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms