RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 NAGAP17050 411 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 ITPKAP23677 461 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 HMGCLP35914 325 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 LIMS1P48059 325 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 BEX3Q00994 111 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 TAF10Q12962 218 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 DDX39BQ13838 428 aaKnown RBP10.87□□□□□ -0.67
NRDE2-202ENST00000553409 NCF4Q15080 339 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 GGTA1PQ4G0N0 100 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 FLYWCH1Q4VC44 716 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 MZT2BQ6NZ67 158 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 TMEM145Q8NBT3 493 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 ATAD1Q8NBU5 361 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 DNAJA4Q8WW22 397 aaPredicted RBP10.87□□□□□ -0.67
NRDE2-202ENST00000553409 KIAA1143Q96AT1 154 aaPredicted RBP10.87□□□□□ -0.67
NRDE2-202ENST00000553409 SUSD3Q96L08 255 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 HYLS1Q96M11 299 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 MTERF1Q99551 399 aaKnown RBP10.87□□□□□ -0.67
NRDE2-202ENST00000553409 PIP5K1AQ99755 562 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 MARVELD1Q9BSK0 173 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 PPIL3Q9H2H8 161 aaKnown RBP10.87□□□□□ -0.67
NRDE2-202ENST00000553409 PPP1R3EQ9H7J1 279 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 CCSER2Q9H7U1 834 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 PAK6Q9NQU5 681 aaPredicted RBP10.87□□□□□ -0.67
NRDE2-202ENST00000553409 EVA1BQ9NVM1 165 aa10.87□□□□□ -0.67
NRDE2-202ENST00000553409 PLXNA4Q9HCM2 1894 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 LINC00862A6NCI5 91 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 TRIM77I1YAP6 450 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 BTN3A3O00478 584 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 PRKAR1AP10644 381 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 TNNI3P19429 210 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 XCR1P46094 333 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 ZNF91Q05481 1191 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 CNIH2Q6PI25 160 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 USP30Q70CQ3 517 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 ZNF467Q7Z7K2 595 aaPredicted RBP10.86□□□□□ -0.67
NRDE2-202ENST00000553409 DTX3Q8N9I9 347 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 L3MBTL4Q8NA19 623 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 SLC37A3Q8NCC5 494 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 PROKR2Q8NFJ6 384 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 OR52P1PQ8NH57 321 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 NFKBIDQ8NI38 313 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 MTERF3Q96E29 417 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 SNTNA6NMZ2 147 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 PITPNM1O00562 1244 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 PRMT3O60678 531 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 HCN1O60741 890 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 CTRB1P17538 263 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 ATF6P18850 670 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 MVDP53602 400 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 PER3P56645 1201 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 CYP4F8P98187 520 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 NFATC2Q13469 925 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 CCNJQ5T5M9 372 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 MFSD14CQ5VZR4 134 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 CTRB2Q6GPI1 263 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.86□□□□□ -0.67
NRDE2-202ENST00000553409 THSD1Q9NS62 852 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 ELF5Q9UKW6 265 aaPredicted RBP10.86□□□□□ -0.67
NRDE2-202ENST00000553409 GREB1Q4ZG55 1949 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 SLC43A1O75387 559 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 TSPAN9O75954 239 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 HLA-DQB1P01920 261 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 AOAHP28039 575 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 SOX9P48436 509 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 HMGA2P52926 109 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 MGAT3Q09327 533 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 MPPE1Q53F39 396 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 CPTPQ5TA50 214 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 MEDAGQ5VYS4 303 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 ANKRD54Q6NXT1 300 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 TEX261Q6UWH6 196 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 ZNF730Q6ZMV8 503 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 ZNF680Q8NEM1 530 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 PCNPQ8WW12 178 aaKnown RBP10.86□□□□□ -0.67
NRDE2-202ENST00000553409 FCRL1Q96LA6 429 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 KCTD7Q96MP8 289 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 TSSK6Q9BXA6 273 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 IL26Q9NPH9 171 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 U3KQ87 197 aa10.86□□□□□ -0.67
NRDE2-202ENST00000553409 A8MUA0 341 aa10.85□□□□□ -0.67
NRDE2-202ENST00000553409 NPIPB8E9PQR5 432 aa10.85□□□□□ -0.67
NRDE2-202ENST00000553409 INMT-MINDY4F8WBC2 141 aa10.85□□□□□ -0.67
NRDE2-202ENST00000553409 H3BNC9 293 aa10.85□□□□□ -0.67
NRDE2-202ENST00000553409 SCAMP2O15127 329 aaKnown RBP10.85□□□□□ -0.67
NRDE2-202ENST00000553409 ORC5O43913 435 aa10.85□□□□□ -0.67
NRDE2-202ENST00000553409 HPGDSO60760 199 aa10.85□□□□□ -0.67
NRDE2-202ENST00000553409 ATN1P54259 1190 aaPredicted RBP10.85□□□□□ -0.67
NRDE2-202ENST00000553409 CHIT1Q13231 466 aa10.85□□□□□ -0.67
NRDE2-202ENST00000553409 C1DQ13901 141 aaKnown RBP10.85□□□□□ -0.67
NRDE2-202ENST00000553409 SCARB2Q14108 478 aa10.85□□□□□ -0.67
NRDE2-202ENST00000553409 ZNF267Q14586 743 aaPredicted RBP10.85□□□□□ -0.67
NRDE2-202ENST00000553409 MFSD13AQ14CX5 517 aa10.85□□□□□ -0.67
NRDE2-202ENST00000553409 TLK2Q86UE8 772 aa10.85□□□□□ -0.67
NRDE2-202ENST00000553409 NPAS3Q8IXF0 933 aa10.85□□□□□ -0.67
NRDE2-202ENST00000553409 SKA2Q8WVK7 121 aaPredicted RBP10.85□□□□□ -0.67
NRDE2-202ENST00000553409 C1GALT1C1Q96EU7 318 aa10.85□□□□□ -0.67
NRDE2-202ENST00000553409 SPIN1Q9Y657 262 aaPredicted RBP10.85□□□□□ -0.67
NRDE2-202ENST00000553409 TRBV4-1A0A0J9YWV2 114 aa10.85□□□□□ -0.67
NRDE2-202ENST00000553409 RFPL3O75679 317 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms