RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 ITM2AO43736 263 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 EEDO75530 441 aaKnown RBP13.74□□□□□ -0.21
SF3B2-214ENST00000533595 CDC123O75794 336 aaPredicted RBP13.74□□□□□ -0.21
SF3B2-214ENST00000533595 SNUPNO95149 360 aaKnown RBP13.74□□□□□ -0.21
SF3B2-214ENST00000533595 CHN1P15882 459 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 HMGCS1Q01581 520 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 TBL3Q12788 808 aaKnown RBP13.74□□□□□ -0.21
SF3B2-214ENST00000533595 STX3Q13277 289 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 SLAMF1Q13291 335 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 DEFB109BQ30KR1 87 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 SH2D4BQ5SQS7 431 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 KANK2Q63ZY3 851 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 CYP20A1Q6UW02 462 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 ATG14Q6ZNE5 492 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 MED25Q71SY5 747 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 TRIM46Q7Z4K8 759 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 PPP1R32Q7Z5V6 425 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 MRGPREQ86SM8 312 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 TRIM42Q8IWZ5 723 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 METTL4Q8N3J2 472 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 AGR3Q8TD06 166 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 METTL21AQ8WXB1 218 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 MAPKAP1Q9BPZ7 522 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 KCMF1Q9P0J7 381 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 ADAM29Q9UKF5 820 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 MAN2B2Q9Y2E5 1009 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 HS3ST3B1Q9Y662 390 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 SPACA6W5XKT8 324 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 CACNA1GO43497 2377 aa13.74□□□□□ -0.21
SF3B2-214ENST00000533595 SCN2AQ99250 2005 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 A0A0A6YYD5 115 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 ARHGAP10A1A4S6 786 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 OR2W5A6NFC9 320 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 TMEM233B4DJY2 109 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 FAM227AF5H4B4 570 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 PEX12O00623 359 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 PCDH17O14917 1159 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 ATP8B1O43520 1251 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 ALOX12BO75342 701 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 LYPLA1O75608 230 aaPredicted RBP13.73□□□□□ -0.21
SF3B2-214ENST00000533595 KLK1P06870 262 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 SLC1A6P48664 564 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 PPP2R2AP63151 447 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 RHAGQ02094 409 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 BST1Q10588 318 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 ATP1A4Q13733 1029 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 IMPG1Q17R60 797 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 ATG16L1Q676U5 607 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 FAAH2Q6GMR7 532 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 RNF165Q6ZSG1 346 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 COMMD6Q7Z4G1 85 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 GPR180Q86V85 440 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 C1orf52Q8N6N3 182 aaKnown RBP13.73□□□□□ -0.21
SF3B2-214ENST00000533595 EFCAB3Q8N7B9 438 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 FAM47BQ8NA70 645 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 RAB3IL1Q8TBN0 382 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 VPS50Q96JG6 964 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 ZNF395Q9H8N7 513 aaPredicted RBP13.73□□□□□ -0.21
SF3B2-214ENST00000533595 LYARQ9NX58 379 aaKnown RBP13.73□□□□□ -0.21
SF3B2-214ENST00000533595 P4HTMQ9NXG6 502 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 MS4A12Q9NXJ0 267 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 ZDHHC2Q9UIJ5 367 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 PHF11Q9UIL8 331 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 FBXW2Q9UKT8 454 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 MRPS33Q9Y291 106 aaKnown RBP13.73□□□□□ -0.21
SF3B2-214ENST00000533595 DNAJC15Q9Y5T4 150 aa13.73□□□□□ -0.21
SF3B2-214ENST00000533595 NUP210LQ5VU65 1888 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 ATMQ13315 3056 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 SLC28A1O00337 649 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 CYR61O00622 381 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 CLDN4O14493 209 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 SOCS6O14544 535 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 TMPRSS11DO60235 418 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 PRMT3O60678 531 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 GBAP04062 536 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 ITGB2P05107 769 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 FAM58BPP0C7Q3 252 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 C8orf89P0DMQ9 161 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 ACPPP15309 386 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 CPN2P22792 545 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 TPP2P29144 1249 aaPredicted RBP13.72□□□□□ -0.21
SF3B2-214ENST00000533595 EFNA3P52797 238 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 ACSM2AQ08AH3 577 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 UGT3A2Q3SY77 523 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 SPIN4Q56A73 249 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 HSP90B2PQ58FF3 399 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 SPDYAQ5MJ70 313 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 CCNYL2Q5T2Q4 361 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 ACSM2BQ68CK6 577 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 MRM1Q6IN84 353 aaKnown RBP13.72□□□□□ -0.21
SF3B2-214ENST00000533595 KIRREL2Q6UWL6 708 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 QSOX2Q6ZRP7 698 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 ZNF595Q8IYB9 648 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 KIRREL3Q8IZU9 778 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 PLPP5Q8NEB5 264 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 CHTF18Q8WVB6 975 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 TWIST2Q8WVJ9 160 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 PTCHD1Q96NR3 888 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 CSF3RQ99062 836 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 C20orf27Q9GZN8 174 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms