RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 OR10H2O60403 315 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 RANBP6O60518 1105 aaKnown RBP4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 SAP30O75446 220 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 TM7SF2O76062 418 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 RNF8O76064 485 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 STBD1O95210 358 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 NFATC1O95644 943 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 BAG3O95817 575 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 MT-ND1P03886 318 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 CSF2P04141 144 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 SMIM18P0DKX4 95 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 SAGP10523 405 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 EGR2P11161 476 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 INSRRP14616 1297 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 GNSP15586 552 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 CEBPBP17676 345 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 HOXA5P20719 270 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 S1PR1P21453 382 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 PCMT1P22061 227 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 PRKACBP22694 351 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 NR4A1P22736 598 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 TUBG1P23258 451 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 ITGA3P26006 1051 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 PRDX2P32119 198 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 ARRB2P32121 409 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 GRIA3P42263 894 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 PTGFRP43088 359 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 GYG1P46976 350 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 METAP2P50579 478 aaKnown RBP eCLIP4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 CYP4F2P78329 520 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 SIM1P81133 766 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 CBX1P83916 185 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 XIAPP98170 497 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 BNIP1Q12981 228 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 IL18Q14116 193 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 VEZF1Q14119 521 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 KPNB1Q14974 876 aaKnown RBP4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 PDK3Q15120 406 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 TRIP10Q15642 601 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 PTGISQ16647 500 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 Q3ZCU0 254 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 PDLIM3Q53GG5 364 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 PIP5KL1Q5T9C9 394 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 FKBP1CQ5VVH2 108 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 AGAP6Q5VW22 663 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 CARD17Q5XLA6 110 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 LAIR1Q6GTX8 287 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 KIAA1161Q6NSJ0 714 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 CTR9Q6PD62 1173 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 BLOC1S2Q6QNY1 142 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 NAPRTQ6XQN6 538 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 DCDC5Q6ZRR9 648 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 PAQR9Q6ZVX9 377 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 GRASPQ7Z6J2 395 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 CROCCP3Q8IVE0 287 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 ARFGAP2Q8N6H7 521 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 LINC01465Q8N7H1 131 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 NECAB1Q8N987 351 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 KBTBD3Q8NAB2 608 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 MCPH1Q8NEM0 835 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 BBS1Q8NFJ9 593 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 OR9K2Q8NGE7 335 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 PNPT1Q8TCS8 783 aaKnown RBP4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 SAP25Q8TEE9 199 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 MCHR2Q969V1 340 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 ZNF707Q96C28 371 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 NAF1Q96HR8 494 aaKnown RBP4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 CCDC17Q96LX7 622 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 PANX2Q96RD6 677 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 CCNL2Q96S94 520 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 NPAS2Q99743 824 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 FSD1LQ9BXM9 530 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 FTHL17Q9BXU8 183 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 WWP1Q9H0M0 922 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 RNF41Q9H4P4 317 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 KCNK13Q9HB14 408 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 SLC2A4RGQ9NR83 387 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 TUBG2Q9NRH3 451 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 FAM207AQ9NSI2 230 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 DLL3Q9NYJ7 618 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 KLHL9Q9P2J3 617 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 THEGQ9P2T0 379 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 SERGEFQ9UGK8 458 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 PSORS1C1Q9UIG5 152 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 FZD10Q9ULW2 581 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 TSC22D4Q9Y3Q8 395 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 WNT6Q9Y6F9 365 aa4.05□□□□□ -1.76
HMGB1P21-201ENST00000502313 GAKO14976 1311 aa4.04□□□□□ -1.76
HMGB1P21-201ENST00000502313 EMSYQ7Z589 1322 aa4.04□□□□□ -1.76
HMGB1P21-201ENST00000502313 AKAP11Q9UKA4 1901 aa4.04□□□□□ -1.76
HMGB1P21-201ENST00000502313 A0A096LPK6 155 aa4.04□□□□□ -1.76
HMGB1P21-201ENST00000502313 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.04□□□□□ -1.76
HMGB1P21-201ENST00000502313 A0A0G2JLL6 359 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P21-201ENST00000502313 GOLGA6L4A6NEF3 574 aa4.04□□□□□ -1.76
HMGB1P21-201ENST00000502313 LINC00473A8K010 186 aa4.04□□□□□ -1.76
HMGB1P21-201ENST00000502313 BECN2A8MW95 431 aa4.04□□□□□ -1.76
HMGB1P21-201ENST00000502313 ZNF879B4DU55 563 aa4.04□□□□□ -1.76
HMGB1P21-201ENST00000502313 SUPT3HB4E1H0 165 aa4.04□□□□□ -1.76
HMGB1P21-201ENST00000502313 HSBP1L1C9JCN9 74 aa4.04□□□□□ -1.76
HMGB1P21-201ENST00000502313 F8W810 466 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms