RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SQLEQ14534 574 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ZNF789Q5FWF6 425 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 AGAP6Q5VW22 663 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 SLC22A10Q63ZE4 541 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 KLC3Q6P597 504 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 TTC5Q8N0Z6 440 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 LINC01561Q8N1V8 128 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 FADS6Q8N9I5 356 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 CCDC148Q8NFR7 591 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 OR13C2Q8NGS9 318 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ZNF398Q8TD17 642 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 CACTINQ8WUQ7 758 aaKnown RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 WASF1Q92558 559 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 PHYHIPQ92561 330 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 MOAP1Q96BY2 351 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 FAM89AQ96GI7 184 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 FUNDC2Q9BWH2 189 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 VN1R1Q9GZP7 353 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 TMEM39BQ9GZU3 492 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 RIBC2Q9H4K1 309 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 IKZF5Q9H5V7 419 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 HYPKQ9NX55 129 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 UTP6Q9NYH9 597 aaKnown RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 PKD2L2Q9NZM6 624 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 MGAT4BQ9UQ53 548 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ZMYM6O95789 1325 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 NCAPD2Q15021 1401 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 GOLGA6L7A0A1B0GV03 622 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ZNF716A6NP11 495 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ANHXE9PGG2 379 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 GAPDHSO14556 408 aaPredicted RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 TSPAN1O60635 241 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 NDUFB8O95169 186 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 KRT6BP04259 564 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ZNF735P0CB33 412 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 CFPP27918 469 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 BRCC3P46736 316 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 KRT6CP48668 564 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 HLCSP50747 726 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 GAS1P54826 345 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 MBTD1Q05BQ5 628 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 NEDD9Q14511 834 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 BCL7AQ4VC05 210 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 CFAP157Q5JU67 520 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.45□□□□□ -2.02
XRN1-210ENST00000472697 ARMC6Q6NXE6 501 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 PIWIL4Q7Z3Z4 852 aaKnown RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 VSTM4Q8IW00 320 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 SRRM1Q8IYB3 904 aaKnown RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 LRRC17Q8N6Y2 441 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 PNPT1Q8TCS8 783 aaKnown RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 ABTB1Q969K4 478 aaPredicted RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 URB1-AS1Q96HZ7 61 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 CASD1Q96PB1 797 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 RBM14Q96PK6 669 aaKnown RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 CCDC77Q9BR77 488 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ROPN1BQ9BZX4 212 aaPredicted RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 TRIM9Q9C026 710 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 LRRCC1Q9C099 1032 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 MTIF3Q9H2K0 278 aaKnown RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 MAGIXQ9H6Y5 334 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 CATSPERBQ9H7T0 1116 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 TECRQ9NZ01 308 aaKnown RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 P2RX2Q9UBL9 471 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 FZD1Q9UP38 647 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 NCKAP1Q9Y2A7 1128 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.45□□□□□ -2.02
XRN1-210ENST00000472697 SPACA6W5XKT8 324 aa2.45□□□□□ -2.02
XRN1-210ENST00000472697 POLR3AO14802 1390 aaPredicted RBP2.44□□□□□ -2.02
XRN1-210ENST00000472697 INSRP06213 1382 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 METTL21EPA6NDL7 271 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 HELTA6NFD8 242 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 E9PBE3 544 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 RFXAPO00287 272 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 ZNF208O43345 1280 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 ECE2O60344 883 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 LRCH4O75427 683 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 CPNE6O95741 557 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 TSPAN15O95858 294 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 IGHG3P01860 377 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 MT-ND1P03886 318 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 GAPDHP04406 335 aaKnown RBP2.44□□□□□ -2.02
XRN1-210ENST00000472697 FGF2P09038 288 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 RFC4P35249 363 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 IER3P46695 156 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 CTSCP53634 463 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 AP3M2P53677 418 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 CACNA2D1P54289 1103 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 CARD18P57730 90 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 ABATP80404 500 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 SLC34A1Q06495 639 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 ILKQ13418 452 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 SELPLGQ14242 412 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 RBM39Q14498 530 aaKnown RBP2.44□□□□□ -2.02
XRN1-210ENST00000472697 HERC3Q15034 1050 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 CHI3L2Q15782 390 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 ANKRD55Q3KP44 614 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 Q4G0T1 1027 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 DCAF10Q5QP82 559 aa2.44□□□□□ -2.02
XRN1-210ENST00000472697 PHYHD1Q5SRE7 291 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms