RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 AMIGO1Q86WK6 493 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 NIPA2Q8N8Q9 360 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 CCDC63Q8NA47 563 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 OCC1Q8TAD7 63 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 ATP6V1E2Q96A05 226 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 PGM2Q96G03 612 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 GMPPAQ96IJ6 420 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 GLT1D1Q96MS3 346 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 JAKMIP1Q96N16 626 aaKnown RBP2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 NECTIN4Q96NY8 510 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 TGS1Q96RS0 853 aaKnown RBP2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 INPP5KQ9BT40 448 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 MINDY3Q9H8M7 445 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 PHPT1Q9NRX4 125 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 ATAD3AQ9NVI7 634 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 DNAJB9Q9UBS3 223 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 CACNG5Q9UF02 275 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 EPHA6Q9UF33 1036 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 C19orf25Q9UFG5 118 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 GMEB2Q9UKD1 530 aa2.88□□□□□ -1.95
HMGB3P12-201ENST00000438745 SPTBN2O15020 2390 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 IGHV4-4A0A075B6R2 117 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 J3QKU1 62 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 SLC30A4O14863 429 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 KLF11O14901 512 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 ARHGEF9O43307 516 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 PGK1P00558 417 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 RAF1P04049 648 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 CYBAP13498 195 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 EPORP19235 508 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 SSTR1P30872 391 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 CLK1P49759 484 aaKnown RBP2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 DNA2P51530 1060 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 MFAP3P55082 362 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 CLDN15P56746 228 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 SNRPD1P62314 119 aaKnown RBP2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 CCNA1P78396 465 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 SCN1BQ07699 218 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 TNK1Q13470 666 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 EXT1Q16394 746 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 RBBP7Q16576 425 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 LPAL2Q16609 132 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 ALDH1L2Q3SY69 923 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 GPR33Q49SQ1 333 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 CCDC152Q4G0S7 254 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 PWWP2BQ6NUJ5 590 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 CYB5D1Q6P9G0 228 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 Q6ZSR9 355 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 BTN2A1Q7KYR7 527 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 PTAR1Q7Z6K3 402 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 DEFB128Q7Z7B8 93 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 LACC1Q8IV20 430 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 CERS5Q8N5B7 392 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 LRTM2Q8N967 370 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 TRPV1Q8NER1 839 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 OR7A2PQ8NGA2 310 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 PHOSPHO2Q8TCD6 241 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 MRGPRDQ8TDS7 321 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 METTL21AQ8WXB1 218 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 ARHGAP45Q92619 1136 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 RAD54LQ92698 747 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 MR1Q95460 341 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 MRPL38Q96DV4 380 aaKnown RBP2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 MAGED4Q96JG8 741 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 C4orf45Q96LM5 186 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 NDNQ99608 321 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 MAP3K3Q99759 626 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 FAM49AQ9H0Q0 323 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 CLMPQ9H6B4 373 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 ATP13A3Q9H7F0 1226 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 RNF121Q9H920 327 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 PKD2L2Q9NZM6 624 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 OR6C2Q9NZP2 312 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 ASIC3Q9UHC3 531 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 ANGPTL3Q9Y5C1 460 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 DNAH14Q0VDD8 3507 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 KIF16BQ96L93 1317 aa2.87□□□□□ -1.95
HMGB3P12-201ENST00000438745 ARID2Q68CP9 1835 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 COL4A1P02462 1669 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 A0A087WV48 116 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 IGKV3D-20A0A0C4DH25 116 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 A0A0U1RQG5 324 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 SERINC4A6NH21 518 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 LOC730098B7Z3J9 87 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 PRSS46E5RG02 174 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 ST8SIA3O43173 380 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 HTATSF1O43719 755 aaKnown RBP2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 SELENOFO60613 162 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 FCGR3BO75015 233 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 GLRA3O75311 464 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 TGDSO95455 350 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 BAG3O95817 575 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 PRB1P04280 392 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 RLN1P04808 185 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 ATP1B1P05026 303 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 ANKRD34CP0C6C1 535 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 SFTPDP35247 375 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 CETN2P41208 172 aa2.86□□□□□ -1.95
HMGB3P12-201ENST00000438745 ALDH3A2P51648 485 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms