RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 RPP25Q9BUL9 199 aaKnown RBP12.74□□□□□ -0.37
MCF2L-213ENST00000421756 TRIT1Q9H3H1 467 aaKnown RBP12.74□□□□□ -0.37
MCF2L-213ENST00000421756 WDR37Q9Y2I8 494 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 LCMT2O60294 686 aaKnown RBP12.74□□□□□ -0.37
MCF2L-213ENST00000421756 CPNE6O95741 557 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 ADH1CP00326 375 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 SSR2P43308 183 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 TMBIM6P55061 237 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 SYPL1Q16563 259 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 TIGD6Q17RP2 521 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 C9orf64Q5T6V5 341 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 PTCHD4Q6ZW05 846 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 SHFQ7M4L6 423 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 DSG4Q86SJ6 1040 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 GPR65Q8IYL9 337 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 TMEFF1Q8IYR6 380 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 CCDC116Q8IYX3 515 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 SHISA5Q8N114 240 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 OR8J2Q8NGG1 315 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 MUL1Q969V5 352 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 TMEM165Q9HC07 324 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 ACOT13Q9NPJ3 140 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 TAS2R9Q9NYW1 312 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 PCDHGB3Q9Y5G1 929 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 PCDHGA6Q9Y5G7 932 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 H0YIV9 168 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 HYAL3O43820 417 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-213ENST00000421756 CH25HO95992 272 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 HPRP00739 348 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 RXRGP48443 463 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 SELENOWP63302 87 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 GGTA1PQ4G0N0 100 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 SPIN4Q56A73 249 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 CLEC12AQ5QGZ9 265 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 ANXA8L1Q5VT79 327 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 ZDHHC20Q5W0Z9 365 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 TANGO2Q6ICL3 276 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 OR4N5Q8IXE1 308 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 FLCNQ8NFG4 579 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 PJA1Q8NG27 643 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 OR56A3Q8NH54 315 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 MCFD2Q8NI22 146 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 ZDHHC5Q9C0B5 715 aa12.74□□□□□ -0.37
MCF2L-213ENST00000421756 TRBV4-1A0A0J9YWV2 114 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 SPINT1O43278 529 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 GASTP01350 101 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 SLC35G4P0C7Q5 338 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 P2RY2P41231 377 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 ALDH6A1Q02252 535 aaKnown RBP12.73□□□□□ -0.37
MCF2L-213ENST00000421756 LASP1Q14847 261 aaKnown RBP12.73□□□□□ -0.37
MCF2L-213ENST00000421756 MOGQ16653 247 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 TRIM40Q6P9F5 258 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 SYNPOQ8N3V7 929 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 HDDC3Q8N4P3 179 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 ANKRD53Q8N9V6 530 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 OR8K5Q8NH50 307 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 FKBP10Q96AY3 582 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 SH3YL1Q96HL8 342 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-213ENST00000421756 C7orf34Q96L11 122 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 TAAR2Q9P1P5 351 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 ENPP5Q9UJA9 477 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 HEATR5BQ9P2D3 2071 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 GRXCR2A6NFK2 248 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 PLPP1O14494 284 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 PTHP01270 115 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 FURINP09958 794 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 NR2F1P10589 423 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 ALOX12P18054 663 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 PCMT1P22061 227 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 CNR2P34972 360 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 SERPINB10P48595 397 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 SLC35A2P78381 396 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 MTAPQ13126 283 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 DCDC5Q6ZRR9 648 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 TSEN54Q7Z6J9 526 aaKnown RBP12.73□□□□□ -0.37
MCF2L-213ENST00000421756 WDR36Q8NI36 951 aaKnown RBP12.73□□□□□ -0.37
MCF2L-213ENST00000421756 OR5M11Q96RB7 305 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 DCSTAMPQ9H295 470 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 KLHL31Q9H511 634 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 C8orf4Q9NR00 106 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 ATAD3AQ9NVI7 634 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 ZNF282Q9UDV7 671 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-213ENST00000421756 PLXND1Q9Y4D7 1925 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 ZNF860A6NHJ4 632 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 EIF2S1P05198 315 aaKnown RBP12.73□□□□□ -0.37
MCF2L-213ENST00000421756 MAP4K2Q12851 820 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 DEPDC1Q5TB30 811 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 SLC34A3Q8N130 599 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 RAD51AP1Q96B01 352 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 TMEM19Q96HH6 336 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 ALPK1Q96QP1 1244 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 SEC14L3Q9UDX4 400 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 PPIL1Q9Y3C6 166 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 IRAK3Q9Y616 596 aa12.73□□□□□ -0.37
MCF2L-213ENST00000421756 CLDN25C9JDP6 229 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 EN2P19622 333 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-213ENST00000421756 GRK5P34947 590 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 MRPL19P49406 292 aaKnown RBP12.72□□□□□ -0.37
MCF2L-213ENST00000421756 CLDN2P57739 230 aa12.72□□□□□ -0.37
MCF2L-213ENST00000421756 DSTNP60981 165 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms