RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 PCDHGB3Q9Y5G1 929 aa7.98□□□□□ -1.13
SNX13-201ENST00000409076 MYO16Q9Y6X6 1858 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 ZC3H12DA2A288 527 aaKnown RBP7.97□□□□□ -1.13
SNX13-201ENST00000409076 ZNF860A6NHJ4 632 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 AGAP5A6NIR3 686 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 M0R082 166 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 ARHGAP33O14559 1287 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 OR1F1O43749 312 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 GABARAPO95166 117 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 PCCBP05166 539 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 PRPS2P11908 318 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 PCMT1P22061 227 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 CD6P30203 668 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 TNFSF8P32971 234 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 CASP3P42574 277 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 TBPL1P62380 186 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 TUBA3CQ13748 450 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 USP43Q70EL4 1123 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 CHST9Q7L1S5 443 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 COMMD6Q7Z4G1 85 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 LRRTM4Q86VH4 590 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 RAB43Q86YS6 212 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 GLB1L3Q8NCI6 653 aaPredicted RBP7.97□□□□□ -1.13
SNX13-201ENST00000409076 BEST4Q8NFU0 473 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 RHOXF1Q8NHV9 184 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 BBS4Q96RK4 519 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 TUBA1CQ9BQE3 449 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 GORASP2Q9H8Y8 452 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 SP140LQ9H930 580 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 AKIP1Q9NQ31 210 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 CDH7Q9ULB5 785 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 LOC102723532A0A0G2JNH3 316 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 FAM240BA0A1B0GVZ2 78 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 PSMD9O00233 223 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 PRMT3O60678 531 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 SOX30O94993 753 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 PRR35P0CG20 571 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 CELP19835 753 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 HLA-FP30511 346 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 PTSQ03393 145 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 CSTF1Q05048 431 aaKnown RBP7.97□□□□□ -1.13
SNX13-201ENST00000409076 LY6G5CQ5SRR4 150 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 KHDRBS2Q5VWX1 349 aaKnown RBP7.97□□□□□ -1.13
SNX13-201ENST00000409076 ATG9BQ674R7 924 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 HIST2H2AA3Q6FI13 130 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 THOC7Q6I9Y2 204 aaKnown RBP7.97□□□□□ -1.13
SNX13-201ENST00000409076 MRPL10Q7Z7H8 261 aaKnown RBP7.97□□□□□ -1.13
SNX13-201ENST00000409076 PTOV1Q86YD1 416 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 MFSD4AQ8N468 514 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 AADATQ8N5Z0 425 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 ZNF486Q96H40 463 aaPredicted RBP7.97□□□□□ -1.13
SNX13-201ENST00000409076 CLSTN3Q9BQT9 956 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 SLC30A2Q9BRI3 323 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 TSSK6Q9BXA6 273 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 HSPB11Q9Y547 144 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 EYSQ5T1H1 3165 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 PLXNA1Q9UIW2 1896 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 NPIPA5A0A0B4J1W7 369 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 NPIPA7E9PJI5 369 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 WNT9AO14904 365 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 ALDH1A1P00352 501 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 INHBBP09529 407 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 NPIPA8P0DM63 369 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 C7P10643 843 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 SRCP12931 536 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 PSMA1P25786 263 aaKnown RBP7.97□□□□□ -1.13
SNX13-201ENST00000409076 APEX1P27695 318 aaKnown RBP7.97□□□□□ -1.13
SNX13-201ENST00000409076 RPS19P39019 145 aaKnown RBP7.97□□□□□ -1.13
SNX13-201ENST00000409076 XKP51811 444 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 MAPK12P53778 367 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 MRPL28Q13084 256 aaKnown RBP7.97□□□□□ -1.13
SNX13-201ENST00000409076 SYPL1Q16563 259 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 SMU1Q2TAY7 513 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 LRIT3Q3SXY7 679 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 CRB2Q5IJ48 1285 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 DCST1Q5T197 706 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 OTPQ5XKR4 325 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 HSDL2Q6YN16 418 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 IZUMO1Q8IYV9 350 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 ZCCHC10Q8TBK6 192 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 ISG20Q96AZ6 181 aaKnown RBP7.97□□□□□ -1.13
SNX13-201ENST00000409076 CLIP3Q96DZ5 547 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 C17orf62Q9BQA9 187 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 FNDC11Q9BVV2 318 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 SLIRPQ9GZT3 109 aaKnown RBP7.97□□□□□ -1.13
SNX13-201ENST00000409076 P2RY12Q9H244 342 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 POPDC3Q9HBV1 291 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 GPBP1L1Q9HC44 474 aaPredicted RBP7.97□□□□□ -1.13
SNX13-201ENST00000409076 DYRK4Q9NR20 520 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 SPATA2Q9UM82 520 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 SSR3Q9UNL2 185 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 CLCA2Q9UQC9 943 aa7.97□□□□□ -1.13
SNX13-201ENST00000409076 IGLV3-10A0A075B6K4 115 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 FADS2P1A8MWK0 482 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 ARNTLO00327 626 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 MAGEB4O15481 346 aaPredicted RBP7.96□□□□□ -1.13
SNX13-201ENST00000409076 SYPP08247 313 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 ALOX5P09917 674 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 CYBAP13498 195 aa7.96□□□□□ -1.13
SNX13-201ENST00000409076 MYL12AP19105 171 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms