RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 FLRT1Q9NZU1 646 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 ELF5Q9UKW6 265 aaPredicted RBP10.42□□□□□ -0.74
ZNF558-201ENST00000301475 FAM240BA0A1B0GVZ2 78 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 A8MVJ9 347 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 PITPNM1O00562 1244 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 LYRM1O43325 122 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 ANXA5P08758 320 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 CTSHP09668 335 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 ATF6P18850 670 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 PTX3P26022 381 aaPredicted RBP10.41□□□□□ -0.74
ZNF558-201ENST00000301475 SOX9P48436 509 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 MLLT11Q13015 90 aaPredicted RBP10.41□□□□□ -0.74
ZNF558-201ENST00000301475 TRIQKQ629K1 86 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 ANGPTL8Q6UXH0 198 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 ANKS3Q6ZW76 656 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 GPR65Q8IYL9 337 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 NANOGP1Q8N7R0 232 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 DTX3Q8N9I9 347 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 FAM46DQ8NEK8 389 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 KLHL6Q8WZ60 621 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 NELL2Q99435 816 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 DUSP26Q9BV47 211 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 ACAT2Q9BWD1 397 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 MND1Q9BWT6 205 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 ADGRE3Q9BY15 652 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 MAGEH1Q9H213 219 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 NMNAT1Q9HAN9 279 aaPredicted RBP10.41□□□□□ -0.74
ZNF558-201ENST00000301475 C12orf4Q9NQ89 552 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 PAK6Q9NQU5 681 aaPredicted RBP10.41□□□□□ -0.74
ZNF558-201ENST00000301475 THSD1Q9NS62 852 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 AUP1Q9Y679 476 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 PRAMEF33A0A0G2JMD5 474 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 A8MUA0 341 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 NPIPB8E9PQR5 432 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 I3L521 148 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 TLR4O00206 839 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 MPZL2O60487 215 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 HCN1O60741 890 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 PRAMEF10O60809 474 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 XCR1P46094 333 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 SLC9A3P48764 834 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 AGFG1P52594 562 aaKnown RBP10.41□□□□□ -0.74
ZNF558-201ENST00000301475 PER3P56645 1201 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 TWF1Q12792 350 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 TAF1CQ15572 869 aaPredicted RBP10.41□□□□□ -0.74
ZNF558-201ENST00000301475 FRG2Q64ET8 278 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 METTL2BQ6P1Q9 378 aaKnown RBP10.41□□□□□ -0.74
ZNF558-201ENST00000301475 CNIH2Q6PI25 160 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 TMEM65Q6PI78 240 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 RBFAQ8N0V3 343 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 FRG2BQ96QU4 278 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 PARK7Q99497 189 aaKnown RBP10.41□□□□□ -0.74
ZNF558-201ENST00000301475 MARVELD1Q9BSK0 173 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 ZSCAN5AQ9BUG6 496 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 GPR63Q9BZJ6 419 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 ASB8Q9H765 288 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 ANKRA2Q9H9E1 313 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 EVA1BQ9NVM1 165 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 PCDH10Q9P2E7 1040 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 PCDHB9Q9Y5E1 797 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 ZFP37Q9Y6Q3 630 aaPredicted RBP10.41□□□□□ -0.74
ZNF558-201ENST00000301475 SCN8AQ9UQD0 1980 aa10.41□□□□□ -0.74
ZNF558-201ENST00000301475 DSPPQ9NZW4 1301 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 F5H5T6 163 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 H3BNC9 293 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 CBX4O00257 560 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 FABP7O15540 132 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 RECKO95980 971 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 TRBC1P01850 177 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 TNNI3P19429 210 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 CRATP43155 626 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 RPIAP49247 311 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 MFSD13AQ14CX5 517 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 TEAD4Q15561 434 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 MFSD14CQ5VZR4 134 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 ZNF770Q6IQ21 691 aaPredicted RBP10.4□□□□□ -0.74
ZNF558-201ENST00000301475 ANKRD54Q6NXT1 300 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 LINGO4Q6UY18 593 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 HSDL2Q6YN16 418 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 CERS6Q6ZMG9 384 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 C19orf18Q8NEA5 215 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 OR52P1PQ8NH57 321 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 PCNPQ8WW12 178 aaKnown RBP10.4□□□□□ -0.74
ZNF558-201ENST00000301475 DNAJA4Q8WW22 397 aaPredicted RBP10.4□□□□□ -0.74
ZNF558-201ENST00000301475 PIP5K1AQ99755 562 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 PPIL3Q9H2H8 161 aaKnown RBP10.4□□□□□ -0.74
ZNF558-201ENST00000301475 CCSER2Q9H7U1 834 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 COMMD3Q9UBI1 195 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 HELZP42694 1942 aaKnown RBP10.4□□□□□ -0.74
ZNF558-201ENST00000301475 SNTNA6NMZ2 147 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 GABRR3A8MPY1 467 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 BTN3A3O00478 584 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 SCAMP2O15127 329 aaKnown RBP10.4□□□□□ -0.74
ZNF558-201ENST00000301475 KDELR3O43731 214 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 SH3BGRLO75368 114 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 GADD45GO95257 159 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 ITPKAP23677 461 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 HMGCLP35914 325 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 ATN1P54259 1190 aaPredicted RBP10.4□□□□□ -0.74
ZNF558-201ENST00000301475 RPS25P62851 125 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms