RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Tmem265E9Q8G3 109 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Atp1b2P14231 290 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Defb23Q30KP0 166 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Snx21Q3UR97 363 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ankrd53Q3V0J4 497 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gas6Q61592 674 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cdk6Q64261 326 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Nomo1Q6GQT9 1214 aaKnown RBP11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Chrnb3Q8BMN3 464 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cpne1Q8C166 536 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Scamp1Q8K021 338 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr659Q8VGV6 322 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Sult5a1Q91X36 291 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Lgals2Q9CQW5 130 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Akap8lQ9R0L7 642 aaKnown RBP11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Lmtk3Q5XJV6 1424 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Znf536Q8K083 1302 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Vmn2r30K7N5W1 852 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Vmn2r47K7N709 852 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Kcnk1O08581 336 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Best3Q6H1V1 669 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Adam20Q7M763 760 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Clec4b1Q7TS58 209 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Q80VP5 184 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 NsdhlQ9R1J0 362 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Csn2P10598 231 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tmem102Q3UPR7 509 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gm29609Q3UU56 907 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 FukQ7TMC8 1090 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gtf3c2Q8BL74 907 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Skint7A7XV04 395 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ptpn20O55082 426 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Csf1P07141 552 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cpt1aP97742 773 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr1136Q0VBI4 310 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr1036Q7TR85 310 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Lrrtm4Q80XG9 590 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 EtfaQ99LC5 333 aaKnown RBP11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Arv1Q9D0U9 266 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 Prl2b1Q9DAZ2 228 aa11.56□□□□□ -0.56
Trim56-201ENSMUST00000054384 BC024978J3QPC3 361 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tgfb3P17125 410 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ccnd3P30282 292 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cd68P31996 326 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ankrd37Q569N2 159 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 C2cd4cC2CD4Q5HZI2 419 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Spock1Q62288 442 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Pomt2Q8BGQ4 820 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Entpd8Q8K0L2 497 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tmem43Q9DBS1 400 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Fbxl12Q9EPX5 326 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ndst3Q9EQH7 873 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 SvilQ8K4L3 2170 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Fam136b-psA0A140T8T1 138 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ttc39aA2ACP1 578 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr1164A2AVT5 326 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 ChrndP02716 520 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tacr2P30549 384 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Grik2P39087 908 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Stox2Q499E5 926 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Znf786Q8BV42 777 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Mrgprb4Q91ZC0 321 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr705Q9EPF7 316 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 GuloP58710 440 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tie1Q06806 1134 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ecm1Q61508 559 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Piwil4Q8CGT6 848 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Blzf1Q8R2X8 403 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Paip1Q8VE62 400 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Lat2Q9JHL0 203 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Prrt4B2RU40 902 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Xkr6E9Q6C8 638 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Spdye4cI6XKQ3 339 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 SgceO70258 437 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Pim3P58750 326 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Nlrc3Q5DU56 1064 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Zfp658Q5PPQ4 887 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Znf354aQ61751 572 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr643Q8VGY1 314 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Fbxl20Q9CZV8 436 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Dapl1Q9D757 107 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Fam198bQ3UPI1 517 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Pnma8aQ80VM8 430 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ppp1r14aQ91VC7 147 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Med28Q920D3 178 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Actr6Q9D864 396 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Med27Q9DB40 311 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Lrrn4P59383 733 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tmem181aQ3U3W2 474 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Psapl1Q8C1C1 522 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 BtdQ8CIF4 520 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Asb8Q91ZT9 288 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Twist2Q9D030 160 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 TtpalQ9D3D0 343 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Upf1Q9EPU0 1124 aaKnown RBP11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 IckQ9JKV2 629 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 SelenonD3Z2R5 557 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Vmn2r112L7N221 857 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 SmoP56726 793 aa11.55□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ufd1P70362 307 aa11.55□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 102 ms