RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 ZNF285Q96NJ3 590 aa13.08□□□□□ -0.32
TMEM254-213ENST00000613758 CDRT15Q96T59 188 aa13.08□□□□□ -0.32
TMEM254-213ENST00000613758 NDE1Q9NXR1 346 aa13.08□□□□□ -0.32
TMEM254-213ENST00000613758 FAM234BA2RU67 622 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 D6RAR5 112 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 AKAP10O43572 662 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 FOLR1P15328 257 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 PRPS1L1P21108 318 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 HIST1H1TP22492 207 aaPredicted RBP13.07□□□□□ -0.32
TMEM254-213ENST00000613758 TSFMP43897 325 aaKnown RBP13.07□□□□□ -0.32
TMEM254-213ENST00000613758 TAS2R50P59544 299 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 PSME3P61289 254 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 GPR19Q15760 415 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 PIGGQ5H8A4 983 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 TCTE1Q5JU00 501 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 BNC2Q6ZN30 1099 aaPredicted RBP13.07□□□□□ -0.32
TMEM254-213ENST00000613758 ACOT4Q8N9L9 421 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 GLB1L3Q8NCI6 653 aaPredicted RBP13.07□□□□□ -0.32
TMEM254-213ENST00000613758 RCBTB1Q8NDN9 531 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 GFM2Q969S9 779 aaKnown RBP13.07□□□□□ -0.32
TMEM254-213ENST00000613758 SPDL1Q96EA4 605 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 ROGDIQ9GZN7 287 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 SPRTNQ9H040 489 aaPredicted RBP13.07□□□□□ -0.32
TMEM254-213ENST00000613758 IRAK4Q9NWZ3 460 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 NKX1-2Q9UD57 310 aaPredicted RBP13.07□□□□□ -0.32
TMEM254-213ENST00000613758 NDUFAF1Q9Y375 327 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 MRPS2Q9Y399 296 aaKnown RBP13.07□□□□□ -0.32
TMEM254-213ENST00000613758 A0A0A6YYD5 115 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 CFLARO15519 480 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 TMPRSS11DO60235 418 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 ALOX12P18054 663 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 CLNS1AP54105 237 aaKnown RBP13.07□□□□□ -0.32
TMEM254-213ENST00000613758 KCNK10P57789 538 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 ACTR3P61158 418 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 SLAMF1Q13291 335 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 TRMT5Q32P41 509 aaKnown RBP13.07□□□□□ -0.32
TMEM254-213ENST00000613758 PHF19Q5T6S3 580 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 SLITRK4Q8IW52 837 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 RIMKLAQ8IXN7 391 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.07□□□□□ -0.32
TMEM254-213ENST00000613758 TM4SF18Q96CE8 201 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 COPS7BQ9H9Q2 264 aaPredicted RBP13.07□□□□□ -0.32
TMEM254-213ENST00000613758 MYNNQ9NPC7 610 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 POMPQ9Y244 141 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 SLC22A7Q9Y694 548 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 MYO15AQ9UKN7 3530 aa13.07□□□□□ -0.32
TMEM254-213ENST00000613758 A0A1W2PP18 115 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 TMEM150CB9EJG8 249 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 PRMT3O60678 531 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 CIB2O75838 187 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 CERS1P27544 350 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 C2orf80Q0P641 193 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 CEACAM7Q14002 265 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 COL9A2Q14055 689 aaPredicted RBP13.06□□□□□ -0.32
TMEM254-213ENST00000613758 SLC9A5Q14940 896 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 TLR1Q15399 786 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 DEFB134Q4QY38 66 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 CCDC157Q569K6 752 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 COQ5Q5HYK3 327 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 TMEM132CQ8N3T6 1108 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 ZCCHC7Q8N3Z6 543 aaKnown RBP13.06□□□□□ -0.32
TMEM254-213ENST00000613758 ARHGEF39Q8N4T4 335 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 GPATCH1Q9BRR8 931 aaKnown RBP13.06□□□□□ -0.32
TMEM254-213ENST00000613758 CLMPQ9H6B4 373 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 MUC6Q6W4X9 2439 aa13.06□□□□□ -0.32
TMEM254-213ENST00000613758 SCELO95171 688 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 IL3P08700 152 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 FAM58BPP0C7Q3 252 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 MSL3P1P0C860 447 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 ZNF10P21506 573 aaPredicted RBP13.05□□□□□ -0.32
TMEM254-213ENST00000613758 DGKQP52824 942 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 C21orf58P58505 322 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 TRA2BP62995 288 aaKnown RBP13.05□□□□□ -0.32
TMEM254-213ENST00000613758 ZFP36L1Q07352 338 aaKnown RBP13.05□□□□□ -0.32
TMEM254-213ENST00000613758 TRA2AQ13595 282 aaKnown RBP eCLIP13.05□□□□□ -0.32
TMEM254-213ENST00000613758 PAGE3Q5JUK9 113 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 FAM71E1Q6IPT2 247 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 PIP4P1Q86T03 277 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 ENDOVQ8N8Q3 282 aaKnown RBP13.05□□□□□ -0.32
TMEM254-213ENST00000613758 OR1L3Q8NH93 324 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 VPS33AQ96AX1 596 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 ROPN1LQ96C74 230 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 SERINC2Q96SA4 455 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 PHOX2BQ99453 314 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 RNPEPL1Q9HAU8 725 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 FGF21Q9NSA1 209 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 SERTAD3Q9UJW9 196 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 CROTQ9UKG9 612 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 MAPRE3Q9UPY8 281 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 WBP11Q9Y2W2 641 aaKnown RBP13.05□□□□□ -0.32
TMEM254-213ENST00000613758 CROCCQ5TZA2 2017 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 HYKKA2RU49 373 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 FITM1A5D6W6 292 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 CCDC154A6NI56 674 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 FXYD1O00168 92 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 AGRPO00253 132 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 OR2B3O76000 313 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 IL6P05231 212 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 IL1RNP18510 177 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 GSTM5P46439 218 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms