RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	ZNF41	P51814	821 aa	Predicted RBP	3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	RPP38	P78345	283 aa	Known RBP	3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	RUNX3	Q13761	415 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	FASTK	Q14296	549 aa	Known RBP	3.13	□□□□□ -1.91
MATR3-223	ENST00000514402		Q1RN00	199 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	LRRC37A5P	Q49AS3	106 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	LBH	Q53QV2	105 aa	Predicted RBP	3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	VWA2	Q5GFL6	755 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	ZNF506	Q5JVG8	444 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	FHL5	Q5TD97	284 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	SHE	Q5VZ18	495 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	SLC27A4	Q6P1M0	643 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	KRTAP5-2	Q701N4	177 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	C5orf24	Q7Z6I8	188 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	C4orf19	Q8IY42	314 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	CHCHD4	Q8N4Q1	142 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	CCDC191	Q8NCU4	936 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	OR1B1	Q8NGR6	318 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	OR6F1	Q8NGZ6	308 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	OCC1	Q8TAD7	63 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	CNDP2	Q96KP4	475 aa	Known RBP	3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	FER1L6-AS2	Q96M78	137 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	DPEP2	Q9H4A9	486 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	C5orf66	Q9H5L9	145 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	WDR41	Q9HAD4	459 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	LMAN1L	Q9HAT1	526 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	VSIG4	Q9Y279	399 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	MRPL11	Q9Y3B7	192 aa	Known RBP	3.13	□□□□□ -1.91
MATR3-223	ENST00000514402		A8MU76	341 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	SCO2	O43819	266 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	CNTN1	Q12860	1018 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	MAPK11	Q15759	364 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	RFTN2	Q52LD8	501 aa	Predicted RBP	3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	CCDC92	Q53HC0	331 aa	Predicted RBP	3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	ATAD3C	Q5T2N8	411 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	PLPP4	Q5VZY2	271 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	FAM91A1	Q658Y4	838 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	ZNF770	Q6IQ21	691 aa	Predicted RBP	3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	CCBE1	Q6UXH8	406 aa	Predicted RBP	3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	MCM10	Q7L590	875 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	CROCCP3	Q8IVE0	287 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	ZC3H3	Q8IXZ2	948 aa	Known RBP	3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	BANP	Q8N9N5	519 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	BEST4	Q8NFU0	473 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	OR4Q3	Q8NH05	313 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	HEXDC	Q8WVB3	486 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	RADIL	Q96JH8	1075 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	APOL2	Q9BQE5	337 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	MGME1	Q9BQP7	344 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	VIPAS39	Q9H9C1	493 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	PDRG1	Q9NUG6	133 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	B4GALT7	Q9UBV7	327 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	NCKAP1	Q9Y2A7	1128 aa		3.12	□□□□□ -1.91
MATR3-223	ENST00000514402	POGZ	Q7Z3K3	1410 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	HTR3E	A5X5Y0	456 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	RPL37AP8	A6NKH3	93 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	DKC1	O60832	514 aa	Known RBP eCLIP	3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	SIX3	O95343	332 aa	Predicted RBP	3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	THY1	P04216	161 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	VIM	P08670	466 aa	Known RBP	3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	SP9	P0CG40	484 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	TIA1	P31483	386 aa	Known RBP eCLIP	3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	SPR	P35270	261 aa	Predicted RBP	3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	SLC1A3	P43003	542 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	EVC	P57679	992 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	BTG1	P62324	171 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	CETN1	Q12798	172 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	PSMD6	Q15008	389 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	ARMCX4	Q5H9R4	360 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	UTF1	Q5T230	341 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	FAM46C	Q5VWP2	391 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	LEMD1	Q68G75	181 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	MEX3D	Q86XN8	651 aa	Known RBP	3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	ZNF713	Q8N859	430 aa	Predicted RBP	3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	C8orf46	Q8TAG6	207 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	MRAP	Q8TCY5	172 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	CD99L2	Q8TCZ2	262 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	ITLN1	Q8WWA0	313 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	SERAC1	Q96JX3	654 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	FERMT1	Q9BQL6	677 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	CCM2	Q9BSQ5	444 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	PNN	Q9H307	717 aa	Known RBP	3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	NMUR1	Q9HB89	426 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	CWC25	Q9NXE8	425 aa	Predicted RBP	3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	GTF3C4	Q9UKN8	822 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	ISY1	Q9ULR0	285 aa	Known RBP	3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	CELA1	Q9UNI1	258 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	NAALAD2	Q9Y3Q0	740 aa		3.11	□□□□□ -1.91
MATR3-223	ENST00000514402	TRBV5-4	A0A0C4DH59	114 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	IGLON5	A6NGN9	336 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	C5orf52	A6NGY3	159 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	FBP2	O00757	339 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	MLNR	O43193	412 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	OR6B1	O95007	311 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	SEMA4F	O95754	770 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	GBA	P04062	536 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	APOA4	P06727	396 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	HSP90AB1	P08238	724 aa	Known RBP	3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	EEF2	P13639	858 aa	Known RBP	3.1	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms