RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SPATA46Q5T0L3 261 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 ANO5Q75V66 913 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 ADGRD2Q7Z7M1 963 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 NR2C2APQ86WQ0 139 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 BCORP1Q8N888 145 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 DMBX1Q8NFW5 382 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 OR10T2Q8NGX3 314 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 RNF139Q8WU17 664 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 U2AF1L4Q8WU68 220 aaKnown RBP4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 ST6GAL2Q96JF0 529 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 SGK494Q96LW2 274 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 NODALQ96S42 347 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 PCDHB18PQ96TA0 734 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 NDNQ99608 321 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 GPA33Q99795 319 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 ZSCAN5AQ9BUG6 496 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 PUS3Q9BZE2 481 aaKnown RBP4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 MIS12Q9H081 205 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 TMEM117Q9H0C3 514 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 SDCBP2Q9H190 292 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 DPEP3Q9H4B8 488 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 C10orf88Q9H8K7 445 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 VAT1LQ9HCJ6 419 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 SDF2L1Q9HCN8 221 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 SMPD3Q9NY59 655 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 SPHK1Q9NYA1 384 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 TAAR2Q9P1P5 351 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 COPS7AQ9UBW8 275 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 TMED7Q9Y3B3 224 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 AQRO60306 1485 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 GAPVD1Q14C86 1478 aa4.03□□□□□ -1.76
HMGB1P48-201ENST00000446155 TMEM89A2RUT3 159 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 E9PI62 339 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 M0R296 226 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZNF197O14709 1029 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 CHUKO15111 745 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 MAGEB3O15480 346 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 ADAM12O43184 909 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 NME2P1O60361 137 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 KLHL41O60662 606 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 LMX1BO60663 402 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 LRP3O75074 770 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 MTX2O75431 263 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 VPS26AO75436 327 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 RALAP11233 206 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 CYP3A5P20815 502 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 ITGA3P26006 1051 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 NR2C2P49116 596 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 DHPSP49366 369 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 RPS18P62269 152 aaKnown RBP4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 RPP38P78345 283 aaKnown RBP4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 SPIBQ01892 262 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 DMP1Q13316 513 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 MSLNQ13421 630 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 STX1AQ16623 288 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 KRTAP24-1Q3LI83 254 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 USH1GQ495M9 461 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 ARMCX4Q5H9R4 360 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 UGT3A1Q6NUS8 523 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 TMEM139Q8IV31 216 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 MISPQ8IVT2 679 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 GPALPP1Q8IXQ4 340 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZCCHC7Q8N3Z6 543 aaKnown RBP4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 CERS5Q8N5B7 392 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 FADS6Q8N9I5 356 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 LMNTD1Q8N9Z9 388 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 LGALS12Q96DT0 336 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 TTC25Q96NG3 672 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 GUCD1Q96NT3 240 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 INPP4AQ96PE3 977 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 MAP3K3Q99759 626 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 ALKBH7Q9BT30 221 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 FICDQ9BVA6 458 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 LRRC2Q9BYS8 371 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 TLE6Q9H808 572 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 APOBEC3GQ9HC16 384 aaKnown RBP4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZNF334Q9HCZ1 680 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 ACOXLQ9NUZ1 547 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 NMRK1Q9NWW6 199 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 ATXN10Q9UBB4 475 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 NARFQ9UHQ1 456 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 PSORS1C1Q9UIG5 152 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 TNNQ9UQP3 1299 aa4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 DDX49Q9Y6V7 483 aaKnown RBP4.02□□□□□ -1.77
HMGB1P48-201ENST00000446155 E5RGE8 158 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 SGK1O00141 431 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 MAPK13O15264 365 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 FGF17O60258 216 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 GPRIN2O60269 458 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZNF821O75541 412 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 GRAP2O75791 330 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 RAF1P04049 648 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 ATP1A1P05023 1023 aaKnown RBP4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 PROS1P07225 676 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZCCHC18P0CG32 403 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 KRT3P12035 628 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 F3P13726 295 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 B4GALT1P15291 398 aa4.01□□□□□ -1.77
HMGB1P48-201ENST00000446155 MSH3P20585 1137 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms