RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 SLC6A18Q96N87 628 aa15.97■□□□□ 0.15
NPC1L1-203ENST00000423141 HDHD5Q9BXW7 423 aa15.97■□□□□ 0.15
NPC1L1-203ENST00000423141 NMNAT1Q9HAN9 279 aaPredicted RBP15.97■□□□□ 0.15
NPC1L1-203ENST00000423141 NDUFB11Q9NX14 153 aa15.97■□□□□ 0.15
NPC1L1-203ENST00000423141 VPS29Q9UBQ0 182 aa15.97■□□□□ 0.15
NPC1L1-203ENST00000423141 MALT1Q9UDY8 824 aa15.97■□□□□ 0.15
NPC1L1-203ENST00000423141 CCDC88CQ9P219 2028 aa15.97■□□□□ 0.15
NPC1L1-203ENST00000423141 GLYATL1P3A0A0U1RQE8 302 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 ITGB7P26010 798 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 APEX1P27695 318 aaKnown RBP15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 HLA-DMAP28067 261 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 PKLRP30613 574 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 LIMS1P48059 325 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 CAV3P56539 151 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 CTXN3Q4LDR2 81 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 CXCL17Q6UXB2 119 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 PHC2Q8IXK0 858 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 OR4K1Q8NGD4 311 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 SLC16A10Q8TF71 515 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 P2RY13Q9BPV8 354 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 NARFLQ9H6Q4 476 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 NMRK2Q9NPI5 230 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 ATP13A2Q9NQ11 1180 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 GKN1Q9NS71 199 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 TXNL4BQ9NX01 149 aaKnown RBP15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 TEKT2Q9UIF3 430 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 HSPB11Q9Y547 144 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 CCL15-CCL14A0A0B4J2E2 113 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 TRBV5-4A0A0C4DH59 114 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 GADD45GO95257 159 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 THPOP40225 353 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 XCR1P46094 333 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 TUFMP49411 452 aaKnown RBP15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 MAN2A2P49641 1150 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 PCDH1Q08174 1060 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 ACSM2AQ08AH3 577 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 TNK1Q13470 666 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 TEAD4Q15561 434 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 CCL15Q16663 113 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 ACSM2BQ68CK6 577 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 LIX1LQ8IVB5 337 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 SYT14Q8NB59 555 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 FAM193BQ96PV7 902 aaPredicted RBP15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 PIP5K1AQ99755 562 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 MAPKAP1Q9BPZ7 522 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 SH3BP4Q9P0V3 963 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 SSR3Q9UNL2 185 aa15.96■□□□□ 0.15
NPC1L1-203ENST00000423141 NPIPB8E9PQR5 432 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 POLR1CO15160 346 aaPredicted RBP15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 SEC14L5O43304 696 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 PRMT3O60678 531 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 OR2B3O76000 313 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 PRKACBP22694 351 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 WEE1P30291 646 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 CCL23P55773 120 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 RAE1P78406 368 aaKnown RBP15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 MGAT3Q09327 533 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 FCHO2Q0JRZ9 810 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 TARDBPQ13148 414 aaKnown RBP eCLIP15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 SCARB2Q14108 478 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 MRPL58Q14197 206 aaKnown RBP15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 NFE2L1Q14494 772 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 FLYWCH1Q4VC44 716 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 PLET1Q6UQ28 207 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 FAM46DQ8NEK8 389 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 GPR156Q8NFN8 814 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 BRI3BPQ8WY22 251 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 WBP2Q969T9 261 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 MSLNLQ96KJ4 702 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 HTATIP2Q9BUP3 242 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 SPATA9Q9BWV2 254 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 PRM3Q9NNZ6 103 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 KLHL21Q9UJP4 597 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 PRELID1Q9Y255 219 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 TLR4O00206 839 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 ARHGEF9O43307 516 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 MYCP01106 439 aaPredicted RBP15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 PIPP12273 146 aaPredicted RBP15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 POU3F3P20264 500 aaPredicted RBP15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 CPN2P22792 545 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 SDC2P34741 201 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 SLC11A2P49281 568 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 ZNF385BQ569K4 471 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 GDPGP1Q6ZNW5 385 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 TSPAN33Q86UF1 283 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 PLCZ1Q86YW0 608 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 NXPE1Q8N323 547 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 C1orf52Q8N6N3 182 aaKnown RBP15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 GDPD1Q8N9F7 314 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 GALNT6Q8NCL4 622 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 TTC9Q92623 222 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 ZBED6CLQ96FA7 236 aaPredicted RBP15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 TMEM80Q96HE8 168 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 MS4A4AQ96JQ5 239 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 GFM1Q96RP9 751 aaKnown RBP15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 MCOLN1Q9GZU1 580 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 THSD1Q9NS62 852 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 KCTD5Q9NXV2 234 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 SLC23A1Q9UHI7 598 aa15.95■□□□□ 0.14
NPC1L1-203ENST00000423141 C2orf78A6NCI8 922 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms