RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CAV3P56539 151 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 MGAT3Q09327 533 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 P2RY14Q15391 338 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 FLYWCH1Q4VC44 716 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 COX20Q5RI15 118 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 ZBTB2Q8N680 514 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 OR8J2Q8NGG1 315 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 TRAF4Q9BUZ4 470 aaPredicted RBP10.43□□□□□ -0.74
ZNF558-201ENST00000301475 RACGAP1Q9H0H5 632 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 ACER3Q9NUN7 267 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 GPATCH2Q9NW75 528 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 FAM120CQ9NX05 1096 aaKnown RBP10.43□□□□□ -0.74
ZNF558-201ENST00000301475 SSR3Q9UNL2 185 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 SNX11Q9Y5W9 270 aa10.43□□□□□ -0.74
ZNF558-201ENST00000301475 CIB4A0PJX0 185 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 MYL12BO14950 172 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 PRAMEF1O95521 474 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 IL1AP01583 271 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 IGLV3-27P01718 113 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 HLA-DQB1P01920 261 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 PDGFAP04085 211 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 MYL12AP19105 171 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 SLC6A4P31645 630 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 SDC2P34741 201 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 CLDN20P56880 219 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 SRSF11Q05519 484 aaKnown RBP10.42□□□□□ -0.74
ZNF558-201ENST00000301475 HSPA14Q0VDF9 509 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 IFI44LQ53G44 452 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 C10orf120Q5SQS8 335 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 CCNJQ5T5M9 372 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 GPRC6AQ5T6X5 926 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 FRMPD2BQ6IN97 320 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 ZNF852Q6ZMS4 543 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 DDX53Q86TM3 631 aaKnown RBP10.42□□□□□ -0.74
ZNF558-201ENST00000301475 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.42□□□□□ -0.74
ZNF558-201ENST00000301475 ADGRG2Q8IZP9 1017 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 C11orf65Q8NCR3 313 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 PIH1D2Q8WWB5 315 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 ZC3HAV1LQ96H79 300 aaKnown RBP10.42□□□□□ -0.74
ZNF558-201ENST00000301475 QRFPRQ96P65 431 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 DCLRE1CQ96SD1 692 aaKnown RBP10.42□□□□□ -0.74
ZNF558-201ENST00000301475 TCF25Q9BQ70 676 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 SLC32A1Q9H598 525 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 FZD3Q9NPG1 666 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 RHCGQ9UBD6 479 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 TMCC3Q9ULS5 477 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 PLOD3O60568 738 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 PDE9AO76083 593 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 GASTP01350 101 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 ALPIP09923 528 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 ZNF7P17097 686 aaPredicted RBP10.42□□□□□ -0.74
ZNF558-201ENST00000301475 CTRB1P17538 263 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 ALDH9A1P49189 494 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 CRISP1P54107 249 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 RAB25P57735 213 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 TAGLNQ01995 201 aaKnown RBP10.42□□□□□ -0.74
ZNF558-201ENST00000301475 MAB21L1Q13394 359 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 WSCD2Q2TBF2 565 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 ZNF628Q5EBL2 1059 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 CTRB2Q6GPI1 263 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 ZNF598Q86UK7 904 aaKnown RBP10.42□□□□□ -0.74
ZNF558-201ENST00000301475 PDZD3Q86UT5 571 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 THEM5Q8N1Q8 247 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 TMEM145Q8NBT3 493 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 DUSP18Q8NEJ0 188 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 ARHGAP39Q9C0H5 1083 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 AFF4Q9UHB7 1163 aaKnown RBP10.42□□□□□ -0.74
ZNF558-201ENST00000301475 LOC102723532A0A0G2JNH3 316 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 LINC00862A6NCI5 91 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 PDPK1O15530 556 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 PROM1O43490 865 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 SLC22A5O76082 557 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 OR7A10O76100 309 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 SOX14O95416 240 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 SLC2A2P11168 524 aaPredicted RBP10.42□□□□□ -0.74
ZNF558-201ENST00000301475 ETFAP13804 333 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 PTGS2P35354 604 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 PSEN2P49810 448 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 MVDP53602 400 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 RPS24P62847 133 aaKnown RBP10.42□□□□□ -0.74
ZNF558-201ENST00000301475 ABATP80404 500 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 ZNF91Q05481 1191 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 CDH18Q13634 790 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 GGTA1PQ4G0N0 100 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 TRIM69Q86WT6 500 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 TIGD4Q8IY51 512 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 Q8N402 240 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 CLDN22Q8N7P3 220 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 CSGALNACT1Q8TDX6 532 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 KIAA1143Q96AT1 154 aaPredicted RBP10.42□□□□□ -0.74
ZNF558-201ENST00000301475 TMEM80Q96HE8 168 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 FCRL1Q96LA6 429 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 MAPKAP1Q9BPZ7 522 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 C17orf62Q9BQA9 187 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 KATNB1Q9BVA0 655 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 SPATA9Q9BWV2 254 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 CRISPLD1Q9H336 500 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 PPP1R3EQ9H7J1 279 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 RDH14Q9HBH5 336 aa10.42□□□□□ -0.74
ZNF558-201ENST00000301475 ARL15Q9NXU5 204 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms