RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 OR13C3Q8NGS6 347 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 TEKT4Q8WW24 435 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 AZIN2Q96A70 460 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 ZNF689Q96CS4 500 aaPredicted RBP2.74□□□□□ -1.97
ATM-230ENST00000640388 MRPL38Q96DV4 380 aaKnown RBP2.74□□□□□ -1.97
ATM-230ENST00000640388 C18orf12Q96KH6 178 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 VGLL1Q99990 258 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 TRIM51Q9BSJ1 452 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 SHARPINQ9H0F6 387 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 MYNNQ9NPC7 610 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 PPANQ9NQ55 473 aaKnown RBP2.74□□□□□ -1.97
ATM-230ENST00000640388 FAM207AQ9NSI2 230 aaPredicted RBP2.74□□□□□ -1.97
ATM-230ENST00000640388 OR6C2Q9NZP2 312 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 ASIC3Q9UHC3 531 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 GMEB2Q9UKD1 530 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 STUB1Q9UNE7 303 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 PPP2R2CQ9Y2T4 447 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 TMED3Q9Y3Q3 217 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 ANGPTL3Q9Y5C1 460 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 FAM169AQ9Y6X4 670 aa2.74□□□□□ -1.97
ATM-230ENST00000640388 URB1O60287 2271 aaKnown RBP2.73□□□□□ -1.97
ATM-230ENST00000640388 RTTNQ86VV8 2226 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 MAPK8IP3Q9UPT6 1336 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 A0A1W2PRQ8 180 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 SYNDIG1LA6NDD5 238 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 SERINC4A6NH21 518 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 EPHB6O15197 1021 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 MAGEC1O60732 1142 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 GLRA3O75311 464 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 NXPH2O95156 264 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 IGHV2-70P01814 119 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 NR2F1P10589 423 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 CSTF2P33240 577 aaKnown RBP eCLIP2.73□□□□□ -1.97
ATM-230ENST00000640388 GSDMDP57764 484 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 DRP2Q13474 957 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 IL11RAQ14626 422 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 E2F5Q15329 346 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 LPAL2Q16609 132 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 LETM2Q2VYF4 491 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 LCN1P1Q5VSP4 162 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 BSPRYQ5W0U4 402 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 FAAP20Q6NZ36 180 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 TRIM65Q6PJ69 517 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 FAM198BQ6UWH4 519 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 BTN2A1Q7KYR7 527 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 ENOSF1Q7L5Y1 443 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 CAMKMTQ7Z624 323 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 PRPF39Q86UA1 669 aaKnown RBP2.73□□□□□ -1.97
ATM-230ENST00000640388 ZNF440Q8IYI8 595 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 LGI2Q8N0V4 545 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 GPRC5AQ8NFJ5 357 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 VANGL1Q8TAA9 524 aaPredicted RBP2.73□□□□□ -1.97
ATM-230ENST00000640388 ANKRD9Q96BM1 317 aaPredicted RBP2.73□□□□□ -1.97
ATM-230ENST00000640388 FAM20AQ96MK3 541 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 NECTIN4Q96NY8 510 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 AGAP3Q96P47 875 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 ATOH8Q96SQ7 321 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 CABLES2Q9BTV7 478 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 DGCR6LQ9BY27 220 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 FGFBP2Q9BYJ0 223 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 UBXN6Q9BZV1 441 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 NOL11Q9H8H0 719 aaKnown RBP2.73□□□□□ -1.97
ATM-230ENST00000640388 CNOT10Q9H9A5 744 aaKnown RBP2.73□□□□□ -1.97
ATM-230ENST00000640388 TRPV4Q9HBA0 871 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 ERAP1Q9NZ08 941 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 PAK5Q9P286 719 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 RNF150Q9ULK6 438 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 TRPV2Q9Y5S1 764 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 PLXNB3Q9ULL4 1909 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 CENPEQ02224 2701 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 DENND4AQ7Z401 1863 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 PCNX3Q9H6A9 2034 aa2.73□□□□□ -1.97
ATM-230ENST00000640388 TP53BP1Q12888 1972 aaPredicted RBP2.72□□□□□ -1.97
ATM-230ENST00000640388 FRMPD4Q14CM0 1322 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 A0A1W2PPM1 405 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 A0A1W2PPQ1 181 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 E9PQ18 207 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 DKC1O60832 514 aaKnown RBP eCLIP2.72□□□□□ -1.97
ATM-230ENST00000640388 LRP3O75074 770 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 ADRB2P07550 413 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 RAB40ALP0C0E4 278 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 AKR1B1P15121 316 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 IL11P20809 199 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 SP100P23497 879 aaPredicted RBP2.72□□□□□ -1.97
ATM-230ENST00000640388 LEPRP48357 1165 aaKnown RBP2.72□□□□□ -1.97
ATM-230ENST00000640388 PAX9P55771 341 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 SNTB1Q13884 538 aaKnown RBP2.72□□□□□ -1.97
ATM-230ENST00000640388 VEZF1Q14119 521 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 BECN1Q14457 450 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 CTU2Q2VPK5 515 aaKnown RBP2.72□□□□□ -1.97
ATM-230ENST00000640388 HLA-BQ31612 363 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 MCMDC2Q4G0Z9 681 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 PDLIM3Q53GG5 364 aaPredicted RBP2.72□□□□□ -1.97
ATM-230ENST00000640388 FASTKD1Q53R41 847 aaKnown RBP2.72□□□□□ -1.97
ATM-230ENST00000640388 SPECC1Q5M775 1068 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 SLC35D3Q5M8T2 416 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 MFSD4BQ5TF39 518 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 GPR139Q6DWJ6 353 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 SLC25A47Q6Q0C1 308 aa2.72□□□□□ -1.97
ATM-230ENST00000640388 FIP1L1Q6UN15 594 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms