RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 H3BNC9 293 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 GCM2O75603 506 aaPredicted RBP17.61■□□□□ 0.41
UPF1-210ENST00000600689 TSPAN19P0C672 248 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 MAPK1P28482 360 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 SOAT1P35610 550 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 CDC42P60953 191 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 OLR1P78380 273 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 HNRNPA0Q13151 305 aaKnown RBP17.61■□□□□ 0.41
UPF1-210ENST00000600689 VEPH1Q14D04 833 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 FBXO43Q4G163 708 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 GPAT3Q53EU6 434 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 ALG1LQ6GMV1 187 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 NCEH1Q6PIU2 408 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 ATCAYQ86WG3 371 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 SLC43A3Q8NBI5 491 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 SLC7A6Q92536 515 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 TESCQ96BS2 214 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 EPYCQ99645 322 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 PCDHB11Q9Y5F2 797 aa17.61■□□□□ 0.41
UPF1-210ENST00000600689 OR6C75A6NL08 312 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 IGLV3-27P01718 113 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 SRCP12931 536 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 CD72P21854 359 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 CSNK2BP67870 215 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 RGNQ15493 299 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 CPTPQ5TA50 214 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 ERICH5Q6P6B1 374 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 SERPINA13PQ6UXR4 307 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 OPALINQ96PE5 141 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 P2RY13Q9BPV8 354 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 POLR2J2Q9GZM3 115 aaKnown RBP17.6■□□□□ 0.41
UPF1-210ENST00000600689 LINC00597Q9H2U6 94 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 LRFN2Q9ULH4 789 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 V9GYH0 126 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 A0A0X1KG70 313 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 FABP12A6NFH5 140 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 TPST2O60704 377 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 SCN2BO60939 215 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 ETHE1O95571 254 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 CRYZL1O95825 349 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 GALTP07902 379 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 YES1P07947 543 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 HNF1BP35680 557 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 DDOSTP39656 456 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 C22orf42Q6IC83 251 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 TTC23LQ6PF05 361 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 CERS6Q6ZMG9 384 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 HMGN2P46Q86SG4 172 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 OR5H6Q8NGV6 325 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 ENKURQ8TC29 256 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 ASIC4Q96FT7 647 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 COQ7Q99807 217 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 HHATLQ9HCP6 504 aa17.6■□□□□ 0.41
UPF1-210ENST00000600689 PCM1Q15154 2024 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 ADAMDEC1O15204 470 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 GASTP01350 101 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 ANXA4P09525 319 aaPredicted RBP17.59■□□□□ 0.41
UPF1-210ENST00000600689 PSKH1P11801 424 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 ACRV1P26436 265 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 MC1RQ01726 317 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 SYNPOQ8N3V7 929 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 C11orf65Q8NCR3 313 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 CCDC32Q9BV29 185 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 CLN6Q9NWW5 311 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 A0A0B4J293 547 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 A0A0G2JMP0 313 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 MGAT4DA6NG13 374 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 TBL1XO60907 577 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 NOGQ13253 232 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 TIMM50Q3ZCQ8 353 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 MEX3DQ86XN8 651 aaKnown RBP17.59■□□□□ 0.41
UPF1-210ENST00000600689 SLC38A6Q8IZM9 456 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 YIPF7Q8N8F6 280 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 ZFP41Q8N8Y5 198 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 SYT14Q8NB59 555 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 RNF31Q96EP0 1072 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 SLC29A3Q9BZD2 475 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 COMMD3Q9UBI1 195 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 DNMT3LQ9UJW3 386 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 POFUT2Q9Y2G5 429 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 SCN5AQ14524 2016 aa17.59■□□□□ 0.41
UPF1-210ENST00000600689 A0A1W2PQL4 384 aaPredicted RBP17.58■□□□□ 0.41
UPF1-210ENST00000600689 HMX3A6NHT5 357 aa17.58■□□□□ 0.41
UPF1-210ENST00000600689 TMEM229AB2RXF0 380 aa17.58■□□□□ 0.41
UPF1-210ENST00000600689 PLK4O00444 970 aa17.58■□□□□ 0.41
UPF1-210ENST00000600689 SDHBP21912 280 aa17.58■□□□□ 0.41
UPF1-210ENST00000600689 RORCP51449 518 aa17.58■□□□□ 0.41
UPF1-210ENST00000600689 SELENOWP63302 87 aa17.58■□□□□ 0.41
UPF1-210ENST00000600689 SCN1BQ07699 218 aa17.58■□□□□ 0.41
UPF1-210ENST00000600689 ABRQ12979 859 aa17.58■□□□□ 0.41
UPF1-210ENST00000600689 MICAQ29983 383 aa17.58■□□□□ 0.41
UPF1-210ENST00000600689 SDE2Q6IQ49 451 aa17.58■□□□□ 0.41
UPF1-210ENST00000600689 ZNF367Q7RTV3 350 aa17.58■□□□□ 0.41
UPF1-210ENST00000600689 IQCF1Q8N6M8 205 aa17.58■□□□□ 0.41
UPF1-210ENST00000600689 ZNF557Q8N988 423 aaPredicted RBP17.58■□□□□ 0.41
UPF1-210ENST00000600689 GPR26Q8NDV2 337 aa17.58■□□□□ 0.41
UPF1-210ENST00000600689 WFDC5Q8TCV5 224 aa17.58■□□□□ 0.41
UPF1-210ENST00000600689 PCNPQ8WW12 178 aaKnown RBP17.58■□□□□ 0.41
UPF1-210ENST00000600689 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.58■□□□□ 0.41
UPF1-210ENST00000600689 A3GALT2U3KPV4 340 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms