RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 HNF1BP35680 557 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 DCUN1D3Q8IWE4 304 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 ASB12Q8WXK4 309 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 TMEM41AQ96HV5 264 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 ZNF717Q9BY31 904 aaPredicted RBP10.59□□□□□ -0.71
VAPB-204ENST00000475243 MS4A12Q9NXJ0 267 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 PIGRP01833 764 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 ATF6P18850 670 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 SLAMF1Q13291 335 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 SNTA1Q13424 505 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 C1orf189Q5VU69 101 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 KRTCAP2Q8N6L1 136 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 SORCS1Q8WY21 1168 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 OSTF1Q92882 214 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 IRF7Q92985 503 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 FZD3Q9NPG1 666 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 VSTM5A8MXK1 200 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 SPARCP09486 303 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 GSTM3P21266 225 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 EDNRBP24530 442 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 LRP10Q7Z4F1 713 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 TXNDC5Q8NBS9 432 aaKnown RBP10.59□□□□□ -0.71
VAPB-204ENST00000475243 SHKBP1Q8TBC3 707 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 OTUB2Q96DC9 234 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 MSLNLQ96KJ4 702 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 NPLQ9BXD5 320 aaPredicted RBP10.59□□□□□ -0.71
VAPB-204ENST00000475243 ITPAQ9BY32 194 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 CA14Q9ULX7 337 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 ALG5Q9Y673 324 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 TRAV6A0A075B6T7 132 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 SLC22A1O15245 554 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 HCRTR2O43614 444 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 IFNA21P01568 189 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 SOX2P48431 317 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 JAG1P78504 1218 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 GALNT2Q10471 571 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 ASTE1Q2TB18 679 aaPredicted RBP10.58□□□□□ -0.72
VAPB-204ENST00000475243 KIAA1191Q96A73 305 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 AURKBQ96GD4 344 aaPredicted RBP10.58□□□□□ -0.72
VAPB-204ENST00000475243 ZNF641Q96N77 438 aaPredicted RBP10.58□□□□□ -0.72
VAPB-204ENST00000475243 ZNF700Q9H0M5 742 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 NLGN3Q9NZ94 848 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 MLXQ9UH92 298 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 METTL21EPA6NDL7 271 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 ADH1BP00325 375 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 KCNE1P15382 129 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 STC1P52823 247 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 ANKDD1AQ495B1 522 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 ZNF678Q5SXM1 525 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 OR4K14Q8NGD5 310 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 FANK1Q8TC84 345 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 ZNF350Q9GZX5 532 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 CD320Q9NPF0 282 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 ACTR3BQ9P1U1 418 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 PSAT1Q9Y617 370 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 BEST1O76090 585 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 GALTP07902 379 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 RHOP08100 348 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 PCSK2P16519 638 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 SLC25A25Q6KCM7 469 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 TSACCQ96A04 125 aaPredicted RBP10.58□□□□□ -0.72
VAPB-204ENST00000475243 FBRSL1Q9HCM7 1045 aaKnown RBP10.58□□□□□ -0.72
VAPB-204ENST00000475243 TAS2R9Q9NYW1 312 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 CAPN5O15484 640 aaPredicted RBP10.58□□□□□ -0.72
VAPB-204ENST00000475243 PROM1O43490 865 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 PRAMEF11O60813 436 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 EBLN1P0CF75 366 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 SLC18A2Q05940 514 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 C2CD4AQ8NCU7 369 aaPredicted RBP10.58□□□□□ -0.72
VAPB-204ENST00000475243 OR56A1Q8NGH5 318 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 PNPLA2Q96AD5 504 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 C14orf166Q9Y224 244 aaKnown RBP10.58□□□□□ -0.72
VAPB-204ENST00000475243 SCO2O43819 266 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 GADD45AP24522 165 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 UPP1Q16831 310 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 ZNF792Q3KQV3 632 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 ZNF805Q5CZA5 627 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 PAMR1Q6UXH9 720 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 LRRC20Q8TCA0 184 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 PPP1R14BQ96C90 147 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 NSUN5Q96P11 429 aaKnown RBP10.58□□□□□ -0.72
VAPB-204ENST00000475243 NLE1Q9NVX2 485 aaPredicted RBP10.58□□□□□ -0.72
VAPB-204ENST00000475243 ERVK-18Q9QC07 812 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 ABCD2Q9UBJ2 740 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 PRRC2BQ5JSZ5 2229 aaKnown RBP10.58□□□□□ -0.72
VAPB-204ENST00000475243 MED1Q15648 1581 aaPredicted RBP10.58□□□□□ -0.72
VAPB-204ENST00000475243 DUOX1Q9NRD9 1551 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 FAM72CH0Y354 149 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 M0R036 132 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 TSPAN6O43657 245 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 NUAK1O60285 661 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 AHSA1O95433 338 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 RPS21P63220 83 aaKnown RBP10.58□□□□□ -0.72
VAPB-204ENST00000475243 RHDQ02161 417 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 FAM72AQ5TYM5 149 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 FAM72DQ6L9T8 149 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 FAM72BQ86X60 149 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 SYNPOQ8N3V7 929 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 TESCQ96BS2 214 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 LRCH3Q96II8 777 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms