RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 SNX11Q9Y5W9 270 aa11.13□□□□□ -0.63
FIRRE-201ENST00000427391 LYVE1Q9Y5Y7 322 aa11.13□□□□□ -0.63
FIRRE-201ENST00000427391 GRXCR1A8MXD5 290 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 ZNF197O14709 1029 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 TNFRSF21O75509 655 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 CLPXO76031 633 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 TBX6O95947 436 aaPredicted RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 C21orf33P30042 268 aaPredicted RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 PCGF2P35227 344 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 IDUAP35475 653 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 CHI3L1P36222 383 aaPredicted RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 PRIM2P49643 509 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 C21orf58P58505 322 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 TOP3AQ13472 1001 aaPredicted RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 SCARB2Q14108 478 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 ZNF829Q3KNS6 432 aaPredicted RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 RPS26P11Q5JNZ5 115 aaPredicted RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 ANXA8L1Q5VT79 327 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 FAHD1Q6P587 224 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 FAM20CQ8IXL6 584 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 PROX1Q92786 737 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 MAGED4Q96JG8 741 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 CNDP2Q96KP4 475 aaKnown RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 NIPSNAP1Q9BPW8 284 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 SLX1AQ9BQ83 275 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 CCDC177Q9NQR7 707 aaPredicted RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 RAD18Q9NS91 495 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 DOLKQ9UPQ8 538 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 PCDHGA6Q9Y5G7 932 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 WASHC1A8K0Z3 465 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 TNFRSF11BO00300 401 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 RNASET2O00584 256 aaKnown RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 PPM1DO15297 605 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 PRNPP04156 253 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 SRPRAP08240 638 aaKnown RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 ACADLP28330 430 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 SPIBQ01892 262 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 CLCA4Q14CN2 919 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 SYT16Q17RD7 645 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 HNRNPA1L2Q32P51 320 aaKnown RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 FAM78AQ5JUQ0 283 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 WASH2PQ6VEQ5 465 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 ETFBKMTQ8IXQ9 262 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 SETD9Q8NE22 299 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 SMG7Q92540 1137 aaKnown RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 F2RL3Q96RI0 385 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 RAD9AQ99638 391 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 SLC6A16Q9GZN6 736 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 SLAMF7Q9NQ25 335 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 TAC3Q9UHF0 121 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 RAB23Q9ULC3 237 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 RNF6Q9Y252 685 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 F5P12259 2224 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 PRAMEF33A0A0G2JMD5 474 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 LINC01553A4QN01 128 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 PRAMEF10O60809 474 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 PCCBP05166 539 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 ITGB7P26010 798 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 GJA8P48165 433 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 IDH2P48735 452 aaKnown RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 ALDH9A1P49189 494 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 SELENOWP63302 87 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 IL18R1Q13478 541 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 KEAP1Q14145 624 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 NR1D2Q14995 579 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 MOGQ16653 247 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 EXOC3L2Q2M3D2 409 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 FAM71E1Q6IPT2 247 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 OLIG3Q7RTU3 272 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 CAMKMTQ7Z624 323 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 CCDC103Q8IW40 242 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 LAS2Q8IYD9 372 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 NRSN1Q8IZ57 195 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 CELF5Q8N6W0 485 aaKnown RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 OR8D1Q8WZ84 308 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 KLK6Q92876 244 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 BORCS5Q969J3 196 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 OTUB2Q96DC9 234 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 LRIG1Q96JA1 1093 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 RSPO3Q9BXY4 272 aaPredicted RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 TBC1D23Q9NUY8 699 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 ZNF282Q9UDV7 671 aaPredicted RBP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 ATP6V1HQ9UI12 483 aa11.12□□□□□ -0.63
FIRRE-201ENST00000427391 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.12□□□□□ -0.63
FIRRE-201ENST00000427391 KIAA1549LQ6ZVL6 1849 aa11.11□□□□□ -0.63
FIRRE-201ENST00000427391 CARNS1A5YM72 827 aa11.11□□□□□ -0.63
FIRRE-201ENST00000427391 PCDH17O14917 1159 aa11.11□□□□□ -0.63
FIRRE-201ENST00000427391 ADH1CP00326 375 aa11.11□□□□□ -0.63
FIRRE-201ENST00000427391 IMPDH2P12268 514 aa11.11□□□□□ -0.63
FIRRE-201ENST00000427391 HNRNPFP52597 415 aaKnown RBP11.11□□□□□ -0.63
FIRRE-201ENST00000427391 ZNF33BQ06732 778 aa11.11□□□□□ -0.63
FIRRE-201ENST00000427391 ITGADQ13349 1161 aa11.11□□□□□ -0.63
FIRRE-201ENST00000427391 PPIGQ13427 754 aaKnown RBP eCLIP11.11□□□□□ -0.639e-8■■□□□ 12.4
FIRRE-201ENST00000427391 TCEA2Q15560 299 aa11.11□□□□□ -0.63
FIRRE-201ENST00000427391 TBC1D25Q3MII6 688 aa11.11□□□□□ -0.63
FIRRE-201ENST00000427391 BCL7AQ4VC05 210 aa11.11□□□□□ -0.63
FIRRE-201ENST00000427391 TMEM240Q5SV17 173 aa11.11□□□□□ -0.63
FIRRE-201ENST00000427391 PRAMEF14Q5SWL7 426 aa11.11□□□□□ -0.63
FIRRE-201ENST00000427391 GCNT6Q5T4J0 391 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms