RNA–Protein interactions for RNA: ENST00000402203.5

TNRC6B-203, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNRC6B, Length 3,444 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-203ENST00000402203 CRISP3P54108 245 aa12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 PRKAG1P54619 331 aa12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 NCS1P62166 190 aa12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 SCARB2Q14108 478 aa12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 NEK10Q6ZWH5 1172 aa12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 RD3Q7Z3Z2 195 aa12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 FRMD1Q8N878 549 aa12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 VANGL1Q8TAA9 524 aaPredicted RBP12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 ASB16Q96NS5 453 aa12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 CXorf36Q9H7Y0 433 aa12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 TM9SF3Q9HD45 589 aa12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 CD93Q9NPY3 652 aa12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 RAD18Q9NS91 495 aa12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 NDUFAF4Q9P032 175 aa12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 MARK1Q9P0L2 795 aa12.74□□□□□ -0.37
TNRC6B-203ENST00000402203 PLXNA2O75051 1894 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 A0A1W2PRB8 838 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 LINC01565O15544 149 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 C8orf89P0DMQ9 161 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 ITGB7P26010 798 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 LSM11P83369 360 aaKnown RBP eCLIP12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 DBPQ10586 325 aaPredicted RBP12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 ELAVL3Q14576 367 aaKnown RBP12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 EXOC3L2Q2M3D2 409 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 IQCCQ4KMZ1 466 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 AMZ2Q86W34 360 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 LEMD2Q8NC56 503 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 PRR14Q9BWN1 585 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 RNF167Q9H6Y7 350 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 TAAR2Q9P1P5 351 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 DKK3Q9UBP4 350 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 TSPAN11A1L157 253 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 TNFRSF11BO00300 401 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 SLC9A3R1O14745 358 aaPredicted RBP12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 SEC14L2O76054 403 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 BCL10O95999 233 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 MAGEA2P43356 314 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 ZNF658BQ4V348 819 aaPredicted RBP12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 KDM4DQ6B0I6 523 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 GTF2IRD2BQ6EKJ0 949 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 WDR53Q7Z5U6 358 aaPredicted RBP12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 GTF2IRD2Q86UP8 949 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 LRRC56Q8IYG6 542 aaPredicted RBP12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 PSD4Q8NDX1 1056 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 DNASE1L2Q92874 299 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 FCRL4Q96PJ5 515 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 RAD21L1Q9H4I0 556 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 TEX10Q9NXF1 929 aaPredicted RBP12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 RPS6KA6Q9UK32 745 aa12.73□□□□□ -0.37
TNRC6B-203ENST00000402203 PLPP1O14494 284 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 OR1F1O43749 312 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 HPRP00739 348 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 ACADLP28330 430 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 TPP2P29144 1249 aaPredicted RBP12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 RNF144AP50876 292 aaPredicted RBP12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 LBX1P52954 281 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 NUP107P57740 925 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 PPIGQ13427 754 aaKnown RBP eCLIP12.72□□□□□ -0.371e-7■■■□□ 16.7
TNRC6B-203ENST00000402203 HIST2H2ACQ16777 129 aaPredicted RBP12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 HIST2H2AA3Q6FI13 130 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 SLC16A12Q6ZSM3 486 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 TERB1Q8NA31 727 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 C11orf65Q8NCR3 313 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 OR5D16Q8NGK9 328 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 FAM81AQ8TBF8 368 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 FAR1Q8WVX9 515 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 OR52A5Q9H2C5 316 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 MAGIXQ9H6Y5 334 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 USE1Q9NZ43 259 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 PCDHGA10Q9Y5H3 936 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 SLC31A1O15431 190 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 NDUFS2O75306 463 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 NTN1O95631 604 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 CPNE6O95741 557 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 SRPRAP08240 638 aaKnown RBP12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 TAS2R38P59533 333 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 NPRL3Q12980 569 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 TP53BP2Q13625 1128 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 SPIN4Q56A73 249 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 KIAA1211LQ6NV74 962 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 FCRL1Q96LA6 429 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 FERD3LQ96RJ6 166 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 KLHL25Q9H0H3 589 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 CHST8Q9H2A9 424 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 KLHL31Q9H511 634 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 TIMMDC1Q9NPL8 285 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 EDDM13A0A1B0GTR0 161 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 SOX14O95416 240 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 FPR1P21462 350 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 PCMT1P22061 227 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 GJA4P35212 333 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 DRD3P35462 400 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 OPRD1P41143 372 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 SNRPNP63162 240 aaKnown RBP12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 ITGADQ13349 1161 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 FGL2Q14314 439 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 RBM48Q5RL73 367 aaKnown RBP12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 RNF165Q6ZSG1 346 aa12.72□□□□□ -0.37
TNRC6B-203ENST00000402203 BCDIN3DQ7Z5W3 292 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms