RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 RPA4Q13156 261 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 ATP1A4Q13733 1029 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 SNCBQ16143 134 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.68□□□□□ -0.38
SGCA-201ENST00000262018 FAM219BQ5XKK7 198 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 IRGCQ6NXR0 463 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 LETMD1Q6P1Q0 360 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 RINLQ6ZS11 566 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 TMEM26Q6ZUK4 368 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 PARP9Q8IXQ6 854 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 KLHDC8AQ8IYD2 350 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 CFAP206Q8IYR0 622 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 ENDOVQ8N8Q3 282 aaKnown RBP12.68□□□□□ -0.38
SGCA-201ENST00000262018 OR4F6Q8NGB9 312 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 RSC1A1Q92681 617 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 WASH6PQ9NQA3 447 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 PFDN4Q9NQP4 134 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 FAM8A1Q9UBU6 413 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 TIMM22Q9Y584 194 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 ANGPTL3Q9Y5C1 460 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 MDC1Q14676 2089 aaKnown RBP12.68□□□□□ -0.38
SGCA-201ENST00000262018 NIPBLQ6KC79 2804 aaeCLIP12.68□□□□□ -0.38
SGCA-201ENST00000262018 UBDO15205 165 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 CPNE3O75131 537 aaKnown RBP12.67□□□□□ -0.38
SGCA-201ENST00000262018 VIPP01282 170 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 ALPPP05187 535 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 EBLN1P0CF75 366 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 PRR35P0CG20 571 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 EPB42P16452 691 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 PIK3R1P27986 724 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 GDF5P43026 501 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 ATP4BP51164 291 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 CCNG1P51959 295 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 NFE2L1Q14494 772 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 SQLEQ14534 574 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 HERC3Q15034 1050 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 XKR7Q5GH72 579 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 METRNLQ641Q3 311 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 WASH2PQ6VEQ5 465 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 RNF165Q6ZSG1 346 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 MILR1Q7Z6M3 343 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 TRIM48Q8IWZ4 208 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 DDIASQ8IXT1 998 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 ZADH2Q8N4Q0 377 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 ATL1Q8WXF7 558 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 ATP6V1E2Q96A05 226 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 ZDHHC12Q96GR4 267 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 CCDC138Q96M89 665 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 TRIM8Q9BZR9 551 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 C1orf21Q9H246 121 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 AKTIPQ9H8T0 292 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 UCK1Q9HA47 277 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 TAS2R1Q9NYW7 299 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 TRPS1Q9UHF7 1281 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 TCFL5Q9UL49 500 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 ACSL5Q9ULC5 683 aa12.67□□□□□ -0.38
SGCA-201ENST00000262018 PDZK1P1A8MUH7 402 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 B2RBV5 119 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 PRICKLE3O43900 615 aaPredicted RBP12.66□□□□□ -0.38
SGCA-201ENST00000262018 WDR47O94967 919 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 C1orf105O95561 183 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 CAPN1P07384 714 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 KRT16P08779 473 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 LINC00032P0C843 101 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 COX4I1P13073 169 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 EPORP19235 508 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 ACADLP28330 430 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 HTR1EP28566 365 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 HALP42357 657 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 CPA2P48052 419 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 IRX1P78414 480 aaPredicted RBP12.66□□□□□ -0.38
SGCA-201ENST00000262018 PTCHD3Q3KNS1 767 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 VWA2Q5GFL6 755 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 ABRAXAS1Q6UWZ7 409 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 FAM83HQ6ZRV2 1179 aaPredicted RBP12.66□□□□□ -0.38
SGCA-201ENST00000262018 CDH24Q86UP0 819 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 ZNF295-AS1Q8N0V1 137 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 CDYL2Q8N8U2 506 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 METTL6Q8TCB7 284 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 UTP4Q969X6 686 aaKnown RBP12.66□□□□□ -0.38
SGCA-201ENST00000262018 ANKRD27Q96NW4 1050 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 CDK15Q96Q40 435 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 MIPEPQ99797 713 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 TACO1Q9BSH4 297 aaKnown RBP12.66□□□□□ -0.38
SGCA-201ENST00000262018 OR52A5Q9H2C5 316 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 CHST11Q9NPF2 352 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 FGF21Q9NSA1 209 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 POLG2Q9UHN1 485 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 BTRCQ9Y297 605 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 ZGRF1Q86YA3 2104 aa12.66□□□□□ -0.38
SGCA-201ENST00000262018 DCHS2Q6V1P9 2916 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 IGHV5-51A0A0C4DH38 117 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 ATP6AP2A0A1C7CYW4 349 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 GYG2O15488 501 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 GSC2O15499 205 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 SCRG1O75711 98 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 ATP6AP2O75787 350 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 KLK3P07288 261 aaPredicted RBP12.65□□□□□ -0.38
SGCA-201ENST00000262018 STSP08842 583 aa12.65□□□□□ -0.38
SGCA-201ENST00000262018 RAB40ALP0C0E4 278 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms