RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Fitm1Q91V79 292 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Lysmd1Q9D0E3 226 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Uqcrc2Q9DB77 453 aaKnown RBP15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Tuba8Q9JJZ2 449 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Dnajb9Q9QYI6 222 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Gabrr3B2RXA8 464 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Crisp4E9PVG4 293 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Psmb9P28076 219 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 CtnsP57757 367 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Msto1Q2YDW2 556 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Bhlha9Q5RJB0 231 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Tpgs2Q66JT5 296 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ppp2r2bQ6ZWR4 443 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 GmppbQ8BTZ7 360 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Gucy1b2Q8BXH3 824 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Olfr1414Q8VGU5 312 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Rsl24d1Q99L28 163 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Neurl2Q9D0S4 285 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Psma4Q9R1P0 261 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Tceal7A3KGA4 98 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Gm6569D3YTM9 175 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Chst13D3Z6E3 336 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Vmn1r88E9Q235 316 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 HbaP01942 142 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ptpn22P29352 802 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Kcna7Q17ST2 489 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Dusp5Q1HL35 384 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Rnf44Q3UHJ8 407 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Clca4bQ3UW98 925 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Olig3Q6PFG8 273 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Megf11Q80T91 1091 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Smndc1Q8BGT7 238 aaKnown RBP15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 ManbaQ8K2I4 879 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Olfr666Q8VH00 318 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Mrpl37Q921S7 423 aaKnown RBP15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ifi44lQ9BDB7 447 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ints11Q9CWS4 600 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 CorinQ9Z319 1113 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Cyp2d37-psF6YKB5 150 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 EllO08856 602 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 IghmP01872 454 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 ThrbP37242 461 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Zmat1Q3V0C1 714 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Rnf43Q5NCP0 784 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Satb1Q60611 764 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Defa17Q64016 82 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Chst2Q80WV3 530 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 UnkQ8BL48 810 aaKnown RBP15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Q8BL95 290 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Tprg1Q8CB49 279 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Stx19Q8R1Q0 292 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Olfr1391Q8VFA4 311 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Impa2Q91UZ5 290 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Zswim2Q9D9X6 631 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Abt1Q9QYL7 269 aaKnown RBP15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Plce1Q8K4S1 2282 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Cd163l1A0A1B0GSB0 991 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Bard1O70445 765 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 BmxP97504 651 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Amigo2Q80ZD9 519 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Cpsf4Q8BQZ5 211 aaKnown RBP15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Defb22Q8BVC1 179 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Olfr693Q8VF89 316 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Col26a1Q91VF6 440 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Cep97Q9CZ62 856 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Hipk3Q9ERH7 1192 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ifi30Q9ESY9 248 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Inpp5eQ9JII1 647 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Wdr90Q6ZPG2 1874 aa15.21■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ccdc163A2AGD7 326 aa15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 Cacng1O70578 223 aa15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gh1P06880 216 aa15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 PdgfbP31240 241 aa15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 Tas2r106Q7M724 308 aa15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 Pced1bQ8BGX1 433 aaKnown RBP15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 Cep68Q8C0D9 733 aa15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 ThtpaQ8JZL3 224 aa15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 Vmn1r234Q8R298 329 aa15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 Vmn1r38Q8R2E1 302 aa15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gtpbp3Q923K4 492 aa15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 EtfaQ99LC5 333 aaKnown RBP15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 3300002I08RikQ9CXH3 147 aa15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 Cmtm6Q9CZ69 183 aa15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 Tlr4Q9QUK6 835 aa15.21■□□□□ 0.02
Trim39-203ENSMUST00000113706 Slfn3A0A1L1STQ7 640 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Fam217bA2AJW5 387 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Olfr1006A2ALD2 312 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Wdr76A6PWY4 622 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Fam170bE9PXT9 378 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Npc1O35604 1277 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 EomesO54839 707 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Orm2P07361 207 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Slc6a11P31650 627 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Inf2Q0GNC1 1273 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Cep295nlQ497N6 533 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Cr1lQ64735 483 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Rab3ipQ68EF0 428 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Mblac2Q8BL86 279 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm9881Q8BR56 211 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gatad2aQ8CHY6 629 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms