Protein–RNA interactions for Protein: Q8R2E1

Vmn1r38, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r38Q8R2E1 Gm25239-201ENSMUST00000174915 86 ntBASIC32,74■■■□□ 2,83
Vmn1r38Q8R2E1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32,56■■■□□ 2,8
Vmn1r38Q8R2E1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31,43■■■□□ 2,62
Vmn1r38Q8R2E1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31,38■■■□□ 2,61
Vmn1r38Q8R2E1 Psd-208ENSMUST00000224556 2034 ntBASIC30,44■■■□□ 2,46
Vmn1r38Q8R2E1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29,94■■■□□ 2,38
Vmn1r38Q8R2E1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29,9■■■□□ 2,38
Vmn1r38Q8R2E1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29,86■■■□□ 2,37
Vmn1r38Q8R2E1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29,61■■■□□ 2,33
Vmn1r38Q8R2E1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29,56■■■□□ 2,32
Vmn1r38Q8R2E1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29,52■■■□□ 2,32
Vmn1r38Q8R2E1 Gm15042-201ENSMUST00000120212 883 ntBASIC29,38■■■□□ 2,29
Vmn1r38Q8R2E1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29,25■■■□□ 2,27
Vmn1r38Q8R2E1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29,1■■■□□ 2,25
Vmn1r38Q8R2E1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29,09■■■□□ 2,25
Vmn1r38Q8R2E1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29,08■■■□□ 2,25
Vmn1r38Q8R2E1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29,06■■■□□ 2,24
Vmn1r38Q8R2E1 Gm15045-201ENSMUST00000117359 883 ntBASIC28,9■■■□□ 2,22
Vmn1r38Q8R2E1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28,66■■■□□ 2,18
Vmn1r38Q8R2E1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Vmn1r38Q8R2E1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28,51■■■□□ 2,15
Vmn1r38Q8R2E1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28,36■■■□□ 2,13
Vmn1r38Q8R2E1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28,34■■■□□ 2,13
Vmn1r38Q8R2E1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,31■■■□□ 2,12
Vmn1r38Q8R2E1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28,24■■■□□ 2,11
Vmn1r38Q8R2E1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28,2■■■□□ 2,11
Vmn1r38Q8R2E1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,19■■■□□ 2,1
Vmn1r38Q8R2E1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28,17■■■□□ 2,1
Vmn1r38Q8R2E1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28,16■■■□□ 2,1
Vmn1r38Q8R2E1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28,15■■■□□ 2,1
Vmn1r38Q8R2E1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28,09■■■□□ 2,09
Vmn1r38Q8R2E1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28,09■■■□□ 2,09
Vmn1r38Q8R2E1 Gm24109-201ENSMUST00000175489 103 ntBASIC28,03■■■□□ 2,08
Vmn1r38Q8R2E1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28■■■□□ 2,07
Vmn1r38Q8R2E1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27,92■■■□□ 2,06
Vmn1r38Q8R2E1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27,89■■■□□ 2,05
Vmn1r38Q8R2E1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27,82■■■□□ 2,04
Vmn1r38Q8R2E1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,81■■■□□ 2,04
Vmn1r38Q8R2E1 Gm10524-201ENSMUST00000181931 1893 ntBASIC27,57■■■□□ 2
Vmn1r38Q8R2E1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27,55■■■□□ 2
Vmn1r38Q8R2E1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27,54■■■□□ 2
Vmn1r38Q8R2E1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27,52■■■□□ 2
Vmn1r38Q8R2E1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27,48■■□□□ 1,99
Vmn1r38Q8R2E1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27,44■■□□□ 1,98
Vmn1r38Q8R2E1 Gm23366-201ENSMUST00000175022 89 ntBASIC27,42■■□□□ 1,98
Vmn1r38Q8R2E1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27,38■■□□□ 1,97
Vmn1r38Q8R2E1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27,37■■□□□ 1,97
Vmn1r38Q8R2E1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27,32■■□□□ 1,96
Vmn1r38Q8R2E1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27,25■■□□□ 1,95
Vmn1r38Q8R2E1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27,18■■□□□ 1,94
Vmn1r38Q8R2E1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27,14■■□□□ 1,94
Vmn1r38Q8R2E1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27,1■■□□□ 1,93
Vmn1r38Q8R2E1 Gm42596-201ENSMUST00000196305 1958 ntBASIC27,04■■□□□ 1,92
Vmn1r38Q8R2E1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27,03■■□□□ 1,92
Vmn1r38Q8R2E1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26,98■■□□□ 1,91
Vmn1r38Q8R2E1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,97■■□□□ 1,91
Vmn1r38Q8R2E1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26,95■■□□□ 1,9
Vmn1r38Q8R2E1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26,94■■□□□ 1,9
Vmn1r38Q8R2E1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26,94■■□□□ 1,9
Vmn1r38Q8R2E1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26,92■■□□□ 1,9
Vmn1r38Q8R2E1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26,87■■□□□ 1,89
Vmn1r38Q8R2E1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26,85■■□□□ 1,89
Vmn1r38Q8R2E1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26,85■■□□□ 1,89
Vmn1r38Q8R2E1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26,84■■□□□ 1,89
Vmn1r38Q8R2E1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26,78■■□□□ 1,88
Vmn1r38Q8R2E1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26,72■■□□□ 1,87
Vmn1r38Q8R2E1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,68■■□□□ 1,86
Vmn1r38Q8R2E1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26,65■■□□□ 1,86
Vmn1r38Q8R2E1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26,59■■□□□ 1,85
Vmn1r38Q8R2E1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26,55■■□□□ 1,84
Vmn1r38Q8R2E1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26,54■■□□□ 1,84
Vmn1r38Q8R2E1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Vmn1r38Q8R2E1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26,47■■□□□ 1,83
Vmn1r38Q8R2E1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26,45■■□□□ 1,83
Vmn1r38Q8R2E1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26,43■■□□□ 1,82
Vmn1r38Q8R2E1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26,39■■□□□ 1,82
Vmn1r38Q8R2E1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,81
Vmn1r38Q8R2E1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
Vmn1r38Q8R2E1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26,31■■□□□ 1,8
Vmn1r38Q8R2E1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26,21■■□□□ 1,79
Vmn1r38Q8R2E1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26,18■■□□□ 1,78
Vmn1r38Q8R2E1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26,12■■□□□ 1,77
Vmn1r38Q8R2E1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26,1■■□□□ 1,77
Vmn1r38Q8R2E1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26,09■■□□□ 1,77
Vmn1r38Q8R2E1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26,06■■□□□ 1,76
Vmn1r38Q8R2E1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26,04■■□□□ 1,76
Vmn1r38Q8R2E1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Vmn1r38Q8R2E1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Vmn1r38Q8R2E1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Vmn1r38Q8R2E1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25,96■■□□□ 1,75
Vmn1r38Q8R2E1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,94■■□□□ 1,74
Vmn1r38Q8R2E1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25,93■■□□□ 1,74
Vmn1r38Q8R2E1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25,92■■□□□ 1,74
Vmn1r38Q8R2E1 Gm27325-201ENSMUST00000175467 74 ntBASIC25,9■■□□□ 1,74
Vmn1r38Q8R2E1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25,9■■□□□ 1,74
Vmn1r38Q8R2E1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25,88■■□□□ 1,73
Vmn1r38Q8R2E1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25,87■■□□□ 1,73
Vmn1r38Q8R2E1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25,87■■□□□ 1,73
Vmn1r38Q8R2E1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Vmn1r38Q8R2E1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25,79■■□□□ 1,72
Retrieved 100 of 76,532 protein–RNA pairs in 9,9 ms