Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Gm25239-201ENSMUST00000174915 86 ntBASIC33.73■■■□□ 2.99
IghmP01872 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
IghmP01872 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
IghmP01872 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
IghmP01872 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
IghmP01872 Psd-208ENSMUST00000224556 2034 ntBASIC30.52■■■□□ 2.48
IghmP01872 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
IghmP01872 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
IghmP01872 Gm15042-201ENSMUST00000120212 883 ntBASIC30.17■■■□□ 2.42
IghmP01872 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
IghmP01872 Gm15045-201ENSMUST00000117359 883 ntBASIC29.67■■■□□ 2.34
IghmP01872 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
IghmP01872 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
IghmP01872 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.5■■■□□ 2.31
IghmP01872 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
IghmP01872 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
IghmP01872 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
IghmP01872 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
IghmP01872 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
IghmP01872 Gm24109-201ENSMUST00000175489 103 ntBASIC28.96■■■□□ 2.23
IghmP01872 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
IghmP01872 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
IghmP01872 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
IghmP01872 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
IghmP01872 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
IghmP01872 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.69■■■□□ 2.18
IghmP01872 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
IghmP01872 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
IghmP01872 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.43■■■□□ 2.14
IghmP01872 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
IghmP01872 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
IghmP01872 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
IghmP01872 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
IghmP01872 Gm23366-201ENSMUST00000175022 89 ntBASIC28.27■■■□□ 2.12
IghmP01872 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
IghmP01872 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
IghmP01872 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
IghmP01872 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
IghmP01872 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
IghmP01872 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
IghmP01872 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.98■■■□□ 2.07
IghmP01872 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.95■■■□□ 2.07
IghmP01872 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.94■■■□□ 2.06
IghmP01872 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
IghmP01872 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.83■■■□□ 2.05
IghmP01872 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
IghmP01872 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
IghmP01872 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
IghmP01872 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
IghmP01872 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.67■■■□□ 2.02
IghmP01872 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
IghmP01872 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
IghmP01872 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.24■■□□□ 1.95
IghmP01872 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
IghmP01872 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.15■■□□□ 1.94
IghmP01872 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
IghmP01872 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
IghmP01872 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
IghmP01872 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
IghmP01872 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.02■■□□□ 1.92
IghmP01872 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
IghmP01872 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
IghmP01872 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
IghmP01872 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
IghmP01872 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
IghmP01872 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.89■■□□□ 1.89
IghmP01872 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
IghmP01872 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
IghmP01872 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
IghmP01872 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
IghmP01872 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
IghmP01872 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
IghmP01872 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.69■■□□□ 1.86
IghmP01872 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
IghmP01872 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
IghmP01872 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.66■■□□□ 1.86
IghmP01872 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
IghmP01872 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
IghmP01872 Gm27325-201ENSMUST00000175467 74 ntBASIC26.58■■□□□ 1.85
IghmP01872 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
IghmP01872 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
IghmP01872 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
IghmP01872 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
IghmP01872 Gm25238-201ENSMUST00000174914 89 ntBASIC26.41■■□□□ 1.82
IghmP01872 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
IghmP01872 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
IghmP01872 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
IghmP01872 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
IghmP01872 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
IghmP01872 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
IghmP01872 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
IghmP01872 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.27■■□□□ 1.8
IghmP01872 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
IghmP01872 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
IghmP01872 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
IghmP01872 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
IghmP01872 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.24■■□□□ 1.79
IghmP01872 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
IghmP01872 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
IghmP01872 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.15■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms