RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Smarcb1Q9Z0H3 385 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Myo7aP97479 2215 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Fam136b-psA0A140T8T1 138 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 AccsA2AIG8 502 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Tnfrsf25B1AWN9 411 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Aadacl2B2RWD2 401 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Vmn2r7E9PYL5 915 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Glyatl3E9Q5L8 290 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm11239E9Q5Z9 360 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm11237F2Z3W5 360 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm11238F2Z478 360 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 IduaP48441 634 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 CntfP51642 198 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Rpl10lP86048 214 aaKnown RBP9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Cpt1aP97742 773 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 FhP97807 507 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Zfp935Q14DI0 353 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 PomkQ3TUA9 349 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm853Q3UNZ2 425 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm428Q3UTE2 360 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm11487Q5RIS0 354 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Cd6Q61003 665 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Znf32Q80V23 272 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Zc3hav1lQ8BFR1 296 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Npas4Q8BGD7 802 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Fbxl3Q8C4V4 428 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Q8K039 155 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Slc5a11Q8K0E3 673 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Spp2Q8K1I3 203 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Vmn1r185Q8R299 319 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Slco3a1Q8R3L5 710 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 RtcAQ9D7H3 366 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Wdr53Q9DB94 358 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Mid2Q9QUS6 705 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm12695A2AGB2 545 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 H60cB1B213 197 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm7945F6QI24 236 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Tex16F6WNY1 1150 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm17019K7N6W5 255 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Rgs7O54829 469 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Zfp28P10078 825 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 HmbsP22907 361 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gja1P23242 382 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Atxn1P54254 791 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 AbatP61922 500 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Dusp5Q1HL35 384 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Tgtp2Q3T9E4 415 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Tmem253Q3UNB8 204 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Tgtp1Q62293 415 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Cdh24Q6PFX6 781 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 ToporsQ80Z37 1033 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Atl1Q8BH66 558 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Adgrg7Q8BM96 785 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 PigzQ8BTP0 560 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Aifm2Q8BUE4 373 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Pp2d1Q8BVT6 620 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 DhrsxQ8VBZ0 335 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Olfr48Q8VGN4 301 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Q9D112 206 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Fam122aQ9DB52 284 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Mkrn2Q9ERV1 416 aaKnown RBP9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Panx1Q9JIP4 426 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 TescQ9JKL5 214 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Nectin3Q9JLB9 549 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Ehd1Q9WVK4 534 aaKnown RBP9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Loxl3Q9Z175 754 aa9.43□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Plxnb3Q9QY40 1902 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Vmn1r77E9PY60 306 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Rnf165E9QAU8 347 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Vmn2r12L7N217 831 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Kif1cO35071 1100 aaKnown RBP9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 HpnO35453 436 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Mybpc3O70468 1270 aaKnown RBP9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 IghmP01872 454 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Mup4P11590 178 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Ncam1P13595 1115 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Atp1b2P14231 290 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 JundP15066 341 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 FesP16879 822 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 ThP24529 498 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Ppm1aP49443 382 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Ruvbl1P60122 456 aaKnown RBP9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Klra2Q60660 288 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Pkp4Q68FH0 1190 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 AntxrlQ8BVM2 641 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Vmn1r69Q8VIC1 319 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Impa2Q91UZ5 290 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Smurf1Q9CUN6 731 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Sohlh2Q9D489 467 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Tmem269Q9D4Y8 254 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 PrepQ9QUR6 710 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 SrrQ9QZX7 339 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Spo11Q9WTK8 396 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gbf1Q6DFZ1 1861 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Scn5aQ9JJV9 2019 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Iqca1lA6H690 825 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Zcchc7B1AX39 541 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm20431E9PY39 371 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 E9Q0B3 247 aa9.42□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Smim18J3QNP2 93 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms