RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PTOV1Q86YD1 416 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 SLC37A3Q8NCC5 494 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 OR4K1Q8NGD4 311 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 ZFAND1Q8TCF1 268 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 PIH1D2Q8WWB5 315 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 RASSF5Q8WWW0 418 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 OPALINQ96PE5 141 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 TTLL2Q9BWV7 592 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 SLAMF7Q9NQ25 335 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 FZD4Q9ULV1 537 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 GRIP1Q9Y3R0 1128 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 CMAHPQ9Y471 501 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 PCDHGB2Q9Y5G2 931 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 PTCH2Q9Y6C5 1203 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 PAPPA2Q9BXP8 1791 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 PEPDP12955 493 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 CD72P21854 359 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 RORCP51449 518 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 CSTF3Q12996 717 aaKnown RBP13.23□□□□□ -0.29
SCARB2-227ENST00000640957 IL18Q14116 193 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 OR2G6Q5TZ20 316 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 MANEALQ5VSG8 457 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 ZZZ3Q8IYH5 903 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 ADGRG2Q8IZP9 1017 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 GALNT6Q8NCL4 622 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 C19orf18Q8NEA5 215 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 BEST4Q8NFU0 473 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 ST8SIA2Q92186 375 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 MRPL9Q9BYD2 267 aaKnown RBP13.23□□□□□ -0.29
SCARB2-227ENST00000640957 MIXL1Q9H2W2 232 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 SLC9A8Q9Y2E8 581 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 C2orf81A6NN90 581 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 KRT6AP02538 564 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 PDGFAP04085 211 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 KRT6BP04259 564 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 HLA-EP13747 358 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 KIR3DL1P43629 444 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 RPS24P62847 133 aaKnown RBP13.23□□□□□ -0.29
SCARB2-227ENST00000640957 PURAQ00577 322 aaKnown RBP13.23□□□□□ -0.29
SCARB2-227ENST00000640957 BCL2L1Q07817 233 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 BTN1A1Q13410 526 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 CTXN3Q4LDR2 81 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 ESCO2Q56NI9 601 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 TYW3Q6IPR3 259 aaKnown RBP13.23□□□□□ -0.29
SCARB2-227ENST00000640957 CALHM3Q86XJ0 350 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 SYT12Q8IV01 421 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 GALNT11Q8NCW6 608 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 UPRTQ96BW1 309 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 MS4A7Q9GZW8 240 aaPredicted RBP13.23□□□□□ -0.29
SCARB2-227ENST00000640957 MBLAC1A4D2B0 266 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-227ENST00000640957 SIGLEC5O15389 551 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 UGT2B17O75795 530 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 FGF1P05230 155 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 ASGR1P07306 291 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 ZNF865P0CJ78 1059 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-227ENST00000640957 TNNI3P19429 210 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 FLT3LGP49771 235 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 CTBP2P56545 445 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 RPL6Q02878 288 aaKnown RBP13.22□□□□□ -0.29
SCARB2-227ENST00000640957 SIGLEC14Q08ET2 396 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 C2orf80Q0P641 193 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 NUMA1Q14980 2115 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 UPP1Q16831 310 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 GLB1LQ6UWU2 654 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 PDZD3Q86UT5 571 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 FCGR1BQ92637 280 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 CCDC32Q9BV29 185 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 MAGIXQ9H6Y5 334 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 ANKHQ9HCJ1 492 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 PCDHB9Q9Y5E1 797 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 TNPO3Q9Y5L0 923 aaKnown RBP13.22□□□□□ -0.29
SCARB2-227ENST00000640957 TRBV5-3A0A0A0MS03 114 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 MAGEB17A8MXT2 336 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 B8ZZF3 427 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 SLC2A2P11168 524 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-227ENST00000640957 ETFAP13804 333 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 PTPN6P29350 595 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 MAGEA2P43356 314 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 AVPR1BP47901 424 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 PSPHP78330 225 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 COX20Q5RI15 118 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 ARTNQ5T4W7 220 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 TRIQKQ629K1 86 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 CHMP1BQ7LBR1 199 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 TSEN54Q7Z6J9 526 aaKnown RBP13.22□□□□□ -0.29
SCARB2-227ENST00000640957 AQP11Q8NBQ7 271 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 ZBED6CLQ96FA7 236 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-227ENST00000640957 TM6SF2Q9BZW4 377 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 MARCH2Q9P0N8 246 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 MAN2B2Q9Y2E5 1009 aa13.22□□□□□ -0.29
SCARB2-227ENST00000640957 TNS1Q9HBL0 1735 aaKnown RBP13.22□□□□□ -0.29
SCARB2-227ENST00000640957 HPGDSO60760 199 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 ALAS2P22557 587 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 PSMA1P25786 263 aaKnown RBP13.21□□□□□ -0.29
SCARB2-227ENST00000640957 LARS2Q15031 903 aaKnown RBP13.21□□□□□ -0.29
SCARB2-227ENST00000640957 Q8N402 240 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 SORBS1Q9BX66 1292 aaKnown RBP13.21□□□□□ -0.29
SCARB2-227ENST00000640957 KCNH6Q9H252 994 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 TPT1P8Q9HAU6 139 aa13.21□□□□□ -0.29
SCARB2-227ENST00000640957 KNL1Q8NG31 2342 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms