RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 IRF8Q02556 426 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 ACSM2AQ08AH3 577 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 HNRNPA0Q13151 305 aaKnown RBP19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 ACSM2BQ68CK6 577 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 C22orf42Q6IC83 251 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 SERPINA13PQ6UXR4 307 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 HS6ST3Q8IZP7 471 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 YIPF7Q8N8F6 280 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CEP295NLQ96MC4 621 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 OPALINQ96PE5 141 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 COQ7Q99807 217 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 GABARAPL3Q9BY60 117 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 GPR62Q9BZJ7 368 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 POLR2J2Q9GZM3 115 aaKnown RBP19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CRNNQ9UBG3 495 aaPredicted RBP19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 RABL2BQ9UNT1 228 aa19.7■□□□□ 0.74
MAP1LC3B-206ENST00000564844 FABP12A6NFH5 140 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 TMEM88BA6NKF7 163 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 TSPAN19P0C672 248 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 PSKH1P11801 424 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 MC1RQ01726 317 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 ALDH6A1Q02252 535 aaKnown RBP19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 RGNQ15493 299 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 XKR6Q5GH73 641 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 TAGAPQ8N103 731 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 C1orf52Q8N6N3 182 aaKnown RBP19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 P2RY13Q9BPV8 354 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 GLYATL1P3A0A0U1RQE8 302 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 A0A1W2PQL4 384 aaPredicted RBP19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CCNB2O95067 398 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 HIST1H2AGP0C0S8 130 aaPredicted RBP19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 HIST1H2ADP20671 130 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 DDOSTP39656 456 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 P2RX3P56373 397 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 SDE2Q6IQ49 451 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 ZFP41Q8N8Y5 198 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 OR4A15Q8NGL6 344 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 PIH1D2Q8WWB5 315 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 HIST1H2AHQ96KK5 128 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 EPYCQ99645 322 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 HIST1H2AJQ99878 128 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 H2AFJQ9BTM1 129 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 MAT2BQ9NZL9 334 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 PCDHB8Q9UN66 801 aa19.69■□□□□ 0.74
MAP1LC3B-206ENST00000564844 YES1P07947 543 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CD72P21854 359 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 IFNA8P32881 189 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 SLC11A2P49281 568 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 ALG1LQ6GMV1 187 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 TESCQ96BS2 214 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 COMMD3Q9UBI1 195 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 PCDHB11Q9Y5F2 797 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 PRPS1L1P21108 318 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 HNF1BP35680 557 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 ATP5C1P36542 298 aaKnown RBP19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 MAP2K5Q13163 448 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 FBXO43Q4G163 708 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 NCEH1Q6PIU2 408 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 IQCF1Q8N6M8 205 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CMTM7Q96FZ5 175 aa19.68■□□□□ 0.74
MAP1LC3B-206ENST00000564844 HMX3A6NHT5 357 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 KIR2DL3P43628 341 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CDH4P55283 916 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CSNK2BP67870 215 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 OLR1P78380 273 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 HYAL2Q12891 473 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CPTPQ5TA50 214 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 PRSS55Q6UWB4 352 aaPredicted RBP19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 SYNPOQ8N3V7 929 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 MYO19Q96H55 970 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 SGIP1Q9BQI5 828 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CARD8Q9Y2G2 431 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 PRAMEF33A0A0G2JMD5 474 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 A0A1W2PQ72 361 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 PRAMEF10O60809 474 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 ANXA4P09525 319 aaPredicted RBP19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 ITGA2P17301 1181 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CD22P20273 847 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CHMP24386 653 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 SOAT1P35610 550 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CDC42P60953 191 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 RPS26P62854 115 aaKnown RBP19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 SELENOWP63302 87 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CHRNEQ04844 493 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 MICAQ29983 383 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 IQCF2Q8IXL9 164 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 ENKURQ8TC29 256 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 WFDC5Q8TCV5 224 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 CIDECQ96AQ7 238 aaPredicted RBP19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 UCK2Q9BZX2 261 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 KLK4Q9Y5K2 254 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 B4DXG7 233 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 GABRB1P18505 474 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 ACRV1P26436 265 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 APEX1P27695 318 aaKnown RBP19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 UQCRC1P31930 480 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 RORCP51449 518 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 SCN1BQ07699 218 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 ABRQ12979 859 aa19.67■□□□□ 0.74
MAP1LC3B-206ENST00000564844 TAF1CQ15572 869 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms