RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 BADQ92934 168 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 NRTNQ99748 197 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 APOL4Q9BPW4 351 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 TMEM121BQ9BXQ6 578 aaPredicted RBP16.85■□□□□ 0.29
USH1C-205ENST00000527020 OR52A5Q9H2C5 316 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 CCDC177Q9NQR7 707 aaPredicted RBP16.85■□□□□ 0.29
USH1C-205ENST00000527020 PLAGL1Q9UM63 463 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 GPR34Q9UPC5 381 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 PRKAB1Q9Y478 270 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 LINC01553A4QN01 128 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 WBP4O75554 376 aaKnown RBP16.84■□□□□ 0.29
USH1C-205ENST00000527020 KLK1P06870 262 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 CCR3P51677 355 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 RPP38P78345 283 aaKnown RBP16.84■□□□□ 0.29
USH1C-205ENST00000527020 EEF1A2Q05639 463 aaKnown RBP16.84■□□□□ 0.29
USH1C-205ENST00000527020 CAMK2GQ13555 558 aaPredicted RBP16.84■□□□□ 0.29
USH1C-205ENST00000527020 ELAVL3Q14576 367 aaKnown RBP16.84■□□□□ 0.29
USH1C-205ENST00000527020 TMEM52BQ4KMG9 183 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 ANGPTL8Q6UXH0 198 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 MMP21Q8N119 569 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 ST13P5Q8NFI4 369 aaPredicted RBP16.84■□□□□ 0.29
USH1C-205ENST00000527020 APH1BQ8WW43 257 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 BORCS5Q969J3 196 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 TAMM41Q96BW9 452 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 PPCDCQ96CD2 204 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 ZNF514Q96K75 400 aaPredicted RBP16.84■□□□□ 0.29
USH1C-205ENST00000527020 GABARAPL3Q9BY60 117 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 TMEM245Q9H330 911 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 RAD21L1Q9H4I0 556 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 C1GALT1Q9NS00 363 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 TPRKBQ9Y3C4 175 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 LYVE1Q9Y5Y7 322 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 DOCK9Q9BZ29 2069 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 CCDC88CQ9P219 2028 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 HEPACAM2A8MVW5 462 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 PCDHGA12O60330 932 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 PIK3CBP42338 1070 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 UBE3AQ05086 875 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 ZNF234Q14588 700 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 HIST2H2ACQ16777 129 aaPredicted RBP16.84■□□□□ 0.29
USH1C-205ENST00000527020 HIST2H2AA3Q6FI13 130 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.84■□□□□ 0.29
USH1C-205ENST00000527020 C12orf76Q8N812 135 aaPredicted RBP16.84■□□□□ 0.29
USH1C-205ENST00000527020 OR5AR1Q8NGP9 310 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 ERLEC1Q96DZ1 483 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 SORBS1Q9BX66 1292 aaKnown RBP16.84■□□□□ 0.29
USH1C-205ENST00000527020 ATAD3AQ9NVI7 634 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 TMEM98Q9Y2Y6 226 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 ZNF451Q9Y4E5 1061 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 PCDHGB3Q9Y5G1 929 aa16.84■□□□□ 0.29
USH1C-205ENST00000527020 CLPXO76031 633 aa16.83■□□□□ 0.28
USH1C-205ENST00000527020 MT-ND2P03891 347 aa16.83■□□□□ 0.28
USH1C-205ENST00000527020 KRT20P35900 424 aa16.83■□□□□ 0.28
USH1C-205ENST00000527020 FCHO2Q0JRZ9 810 aa16.83■□□□□ 0.28
USH1C-205ENST00000527020 PPIGQ13427 754 aaKnown RBP eCLIP16.83■□□□□ 0.28
USH1C-205ENST00000527020 GCNT6Q5T4J0 391 aa16.83■□□□□ 0.28
USH1C-205ENST00000527020 Q6ZNX1 250 aa16.83■□□□□ 0.28
USH1C-205ENST00000527020 ERN2Q76MJ5 926 aaKnown RBP16.83■□□□□ 0.28
USH1C-205ENST00000527020 FAM129CQ86XR2 697 aa16.83■□□□□ 0.28
USH1C-205ENST00000527020 C2orf73Q8N5S3 287 aaPredicted RBP16.83■□□□□ 0.28
USH1C-205ENST00000527020 NFKBIDQ8NI38 313 aa16.83■□□□□ 0.28
USH1C-205ENST00000527020 SPPL2AQ8TCT8 520 aa16.83■□□□□ 0.28
USH1C-205ENST00000527020 TESMINQ9Y4I5 508 aa16.83■□□□□ 0.28
USH1C-205ENST00000527020 VEGFDO43915 354 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 TBX6O95947 436 aaPredicted RBP16.82■□□□□ 0.28
USH1C-205ENST00000527020 TMED1Q13445 227 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 SCARB2Q14108 478 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 SLC5A12Q1EHB4 618 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 FAM78AQ5JUQ0 283 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 PRAMEF14Q5SWL7 426 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 PRAMEF13Q5VWM6 474 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 UNC5DQ6UXZ4 953 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 Q6ZPB1 254 aaPredicted RBP16.82■□□□□ 0.28
USH1C-205ENST00000527020 ENTHD1Q8IYW4 607 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 OR4C15Q8NGM1 316 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 OR5AK3PQ8NH89 298 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 SETD7Q8WTS6 366 aaKnown RBP16.82■□□□□ 0.28
USH1C-205ENST00000527020 YIPF6Q96EC8 236 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 COX14Q96I36 57 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 HRASLS5Q96KN8 279 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 SIGLEC11Q96RL6 698 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 TMEM38AQ9H6F2 299 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 RUBCNLQ9H714 662 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 ZDHHC4Q9NPG8 344 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 RASSF1Q9NS23 344 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 SCN3BQ9NY72 215 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 DEC1Q9P2X7 70 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 TSC22D4Q9Y3Q8 395 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 PCDHGA6Q9Y5G7 932 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 CORINQ9Y5Q5 1042 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 DGKBQ9Y6T7 804 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 ATG2AQ2TAZ0 1938 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 TRANK1O15050 2925 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 PI15O43692 258 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 GABARAPO95166 117 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 IL3P08700 152 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 POU2F2P09086 479 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 TFPTP0C1Z6 253 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 TMIGD1Q6UXZ0 262 aa16.82■□□□□ 0.28
USH1C-205ENST00000527020 CCDC80Q76M96 950 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms