RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 B3GALNT1O75752 331 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 ACTL6BO94805 426 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 IFNA5P01569 189 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 CBSLP0DN79 551 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 CBSP35520 551 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 DPP6P42658 865 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 C12orf29Q8N999 325 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 GLOD4Q9HC38 313 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 COL20A1Q9P218 1284 aa12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 MAGED1Q9Y5V3 778 aaPredicted RBP12.81□□□□□ -0.36
SRGAP3-201ENST00000360413 FUOMA2VDF0 154 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 E7EQ34 232 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 SLC34A2O95436 690 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 ZNF16P17020 682 aaPredicted RBP12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 MAGEA3P43357 314 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 ANKRD22Q5VYY1 191 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 ARMC1Q9NVT9 282 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 FETUBQ9UGM5 382 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 GJE1A6NN92 205 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 HOXD8P13378 290 aaPredicted RBP12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 SHMT1P34896 483 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 AARDQ4LEZ3 155 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 DCST2Q5T1A1 773 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 TMEM198Q66K66 360 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 OTOP3Q7RTS5 596 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 ERMP1Q7Z2K6 904 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 TMEM126BQ8IUX1 230 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 METTL4Q8N3J2 472 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 ENDOVQ8N8Q3 282 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 HIPK2Q9H2X6 1198 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 MKS1Q9NXB0 559 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 KLRF1Q9NZS2 232 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 RAI2Q9Y5P3 530 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 HMX3A6NHT5 357 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 ZNF84P51523 738 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 RPS14P62263 151 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 GAD2Q05329 585 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 TUSC3Q13454 348 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 FGFBP1Q14512 234 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 FAM83HQ6ZRV2 1179 aaPredicted RBP12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 GOLM1Q8NBJ4 401 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 C3orf49Q96BT1 292 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 PYURFQ96I23 114 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 COQ10AQ96MF6 247 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 AGXT2Q9BYV1 514 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 PPP1R14DQ9NXH3 145 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 KLHL13Q9P2N7 655 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 NUPL2O15504 423 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 NTSR2O95665 410 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 PPP5CP53041 499 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 ECH1Q13011 328 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 SLC51AQ86UW1 340 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 CDKN2BP42772 138 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 GK2Q14410 553 aaPredicted RBP12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 SLC24A5Q71RS6 500 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 ACDQ96AP0 544 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 CCM2Q9BSQ5 444 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 SLC25A51Q9H1U9 297 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 FLRT1Q9NZU1 646 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 LAMP5Q9UJQ1 280 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 SERTAD3Q9UJW9 196 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 CLIC3O95833 236 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 IL3P08700 152 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 SLC8B1Q6J4K2 584 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 LYSMD3Q7Z3D4 306 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 GKN2Q86XP6 184 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 ACO2Q99798 780 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 CCDC106Q9BWC9 280 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 LRFN1Q9P244 771 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 EBF1Q9UH73 591 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 DKKL1Q9UK85 242 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 FBXW2Q9UKT8 454 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 ROBO3Q96MS0 1386 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 C17orf113A0A1B0GUU1 675 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 TLX2O43763 284 aaPredicted RBP12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 MT-ND2P03891 347 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 LCKP06239 509 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 MC2RQ01718 297 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 MALLQ13021 153 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 FAM129CQ86XR2 697 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 ARL11Q969Q4 196 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 SLC6A7Q99884 636 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 POT1Q9NUX5 634 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 SNX10Q9Y5X0 201 aa12.8□□□□□ -0.36
SRGAP3-201ENST00000360413 A0A1B0GVI7 797 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 DNAJB6O75190 326 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 PRPS1L1P21108 318 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 SCNN1GP51170 649 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 PRKXP51817 358 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 PPP1R8Q12972 351 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 TAF1AQ15573 450 aaPredicted RBP12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 FAM46DQ8NEK8 389 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 NEIL3Q8TAT5 605 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 PKP4Q99569 1192 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 MEPEQ9NQ76 525 aaPredicted RBP12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 EIF2B3Q9NR50 452 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 HTRA2O43464 458 aaPredicted RBP12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 AOC1P19801 751 aa12.79□□□□□ -0.36
SRGAP3-201ENST00000360413 NMBRP28336 390 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms