RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 PDFQ9HBH1 243 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 ELOVL2Q9NXB9 296 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 ZNF624Q9P2J8 865 aaPredicted RBP11.81□□□□□ -0.52
COL20A1-201ENST00000358894 TBC1D3DA0A087WVF3 549 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 TBC1D3IA0A087WXS9 549 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 TBC1D3EA0A087X179 549 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 TBC1D3KA0A087X1G2 549 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 TBC1D3FA6NER0 549 aaPredicted RBP11.81□□□□□ -0.52
COL20A1-201ENST00000358894 TBC1D3LB9A6J9 549 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 RTCAO00442 366 aaKnown RBP11.81□□□□□ -0.52
COL20A1-201ENST00000358894 NFATC1O95644 943 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 RPLP0P05388 317 aaKnown RBP11.81□□□□□ -0.52
COL20A1-201ENST00000358894 TBC1D3HP0C7X1 549 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 CCL5P13501 91 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 PCSK2P16519 638 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 PSMA1P25786 263 aaKnown RBP11.81□□□□□ -0.52
COL20A1-201ENST00000358894 CTGFP29279 349 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 CLCNKAP51800 687 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 PNLIPRP1P54315 467 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 TBPL1P62380 186 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 TBC1D3GQ6DHY5 549 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 TBC1D3CQ6IPX1 549 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 Q6ZNX1 250 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 TBC1D3Q8IZP1 549 aaPredicted RBP11.81□□□□□ -0.52
COL20A1-201ENST00000358894 OXR1Q8N573 874 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 AQP11Q8NBQ7 271 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 TEX47Q8TBZ9 253 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 IPCEF1Q8WWN9 437 aaPredicted RBP11.81□□□□□ -0.52
COL20A1-201ENST00000358894 DCAF13Q9NV06 445 aaKnown RBP11.81□□□□□ -0.52
COL20A1-201ENST00000358894 A6NL46 340 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 EFCAB14O75071 495 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 ACADMP11310 421 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 RPS26P62854 115 aaKnown RBP11.81□□□□□ -0.52
COL20A1-201ENST00000358894 BORAQ6PGQ7 559 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 HMGN2P46Q86SG4 172 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 DCP2Q8IU60 420 aaKnown RBP11.81□□□□□ -0.52
COL20A1-201ENST00000358894 GALNT12Q8IXK2 581 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 FOXJ1Q92949 421 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 RNFT2Q96EX2 444 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 ERVW-1Q9UQF0 538 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 PCDHB11Q9Y5F2 797 aa11.81□□□□□ -0.52
COL20A1-201ENST00000358894 FER1L6Q2WGJ9 1857 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 AP3D1O14617 1153 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 RHOP08100 348 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 GTF2E2P29084 291 aaKnown RBP11.8□□□□□ -0.52
COL20A1-201ENST00000358894 HLA-FP30511 346 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 NCS1P62166 190 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 DEFB103AP81534 67 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 TCEAL8Q8IYN2 117 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 HMGCLL1Q8TB92 370 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 PXYLP1Q8TE99 480 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 TRUB1Q8WWH5 349 aaKnown RBP11.8□□□□□ -0.52
COL20A1-201ENST00000358894 SLC5A11Q8WWX8 675 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 ART5Q96L15 291 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 FEVQ99581 238 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 TUBA1CQ9BQE3 449 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 NTMT1Q9BV86 223 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 SARDHQ9UL12 918 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 PLK4O00444 970 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 SLC31A1O15431 190 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 ALPLP05186 524 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 CCNYL3P0C7X3 344 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 ALPPL2P10696 532 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 ADH5P11766 374 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 HMGA1P17096 107 aaKnown RBP11.8□□□□□ -0.52
COL20A1-201ENST00000358894 CR2P20023 1033 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 KELP23276 732 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 HOXD11P31277 338 aaPredicted RBP11.8□□□□□ -0.52
COL20A1-201ENST00000358894 TIA1P31483 386 aaKnown RBP eCLIP11.8□□□□□ -0.52
COL20A1-201ENST00000358894 NPRL3Q12980 569 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 IQCCQ4KMZ1 466 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 ZNF544Q6NX49 715 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 DUS1LQ6P1R4 473 aaKnown RBP11.8□□□□□ -0.52
COL20A1-201ENST00000358894 CDK20Q8IZL9 346 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 SPARTQ8N0X7 666 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 ZNF548Q8NEK5 533 aaPredicted RBP11.8□□□□□ -0.52
COL20A1-201ENST00000358894 OR14C36Q8NHC7 312 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 GEMIN6Q8WXD5 167 aaKnown RBP11.8□□□□□ -0.52
COL20A1-201ENST00000358894 SLC9A6Q92581 669 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 SLC38A2Q96QD8 506 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 TRMT61BQ9BVS5 477 aaKnown RBP11.8□□□□□ -0.52
COL20A1-201ENST00000358894 ITPAQ9BY32 194 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 REEP4Q9H6H4 257 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 PHPT1Q9NRX4 125 aaPredicted RBP11.8□□□□□ -0.52
COL20A1-201ENST00000358894 GSTK1Q9Y2Q3 226 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 URB1O60287 2271 aaKnown RBP11.8□□□□□ -0.52
COL20A1-201ENST00000358894 GLOD5A6NK44 160 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 SNX4O95219 450 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 LATS1O95835 1130 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 RETP07949 1114 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 ZNF805Q5CZA5 627 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 XKR7Q5GH72 579 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 SYCE2Q6PIF2 218 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 HSD11B1LQ7Z5J1 315 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 SPRED1Q7Z699 444 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 OR9A1PQ8NGU1 263 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 CXorf40BQ96DE9 158 aa11.8□□□□□ -0.52
COL20A1-201ENST00000358894 PDLIM5Q96HC4 596 aaKnown RBP11.8□□□□□ -0.52
COL20A1-201ENST00000358894 TRIT1Q9H3H1 467 aaKnown RBP11.8□□□□□ -0.52
COL20A1-201ENST00000358894 CCDC59Q9P031 241 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms