RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 GKN1Q9NS71 199 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 LCKP06239 509 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 GLI1P08151 1106 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 PRPS2P11908 318 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 CDK2P24941 298 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 NUDT6P53370 316 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 PLA2G16P53816 162 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 VGLL4Q14135 290 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 PLPPR4Q7Z2D5 763 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 DNAJB8Q8NHS0 232 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 SSUH2Q9Y2M2 353 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 LRRN3E7EW58 273 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 K7EPI3 171 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 FOXE1O00358 373 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 STK16O75716 305 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ATF6P18850 670 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 PTGER4P35408 488 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 CPOXP36551 454 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 COL9A3Q14050 684 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 OR4K15Q8NH41 348 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 LPPQ93052 612 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 RPL10LQ96L21 214 aaKnown RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 MICU1Q9BPX6 476 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 NSUN3Q9H649 340 aaKnown RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 EPHA6Q9UF33 1036 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 MICAL3Q7RTP6 2002 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 DNM1LO00429 736 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 RIPK2O43353 540 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ARL6IP5O75915 188 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ZIC2O95409 532 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 ANXA4P09525 319 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 DLDP09622 509 aaKnown RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 RBMXP38159 391 aaKnown RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 MMP15P51511 669 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 HSPB3Q12988 150 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 NCEH1Q6PIU2 408 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 FAM83HQ6ZRV2 1179 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 TMPRSS6Q8IU80 811 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ADGRF3Q8IZF5 1079 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 SLC2A12Q8TD20 617 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 SEMA4DQ92854 862 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ZSWIM1Q9BR11 485 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 TMED9Q9BVK6 235 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 CD84Q9UIB8 345 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 LOC102725191A0A1B0GVB3 256 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ANKRD61A6NGH8 418 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 SLC22A3O75751 556 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 KLF8O95600 359 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 IDO1P14902 403 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 IRAK1P51617 712 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 DLG2Q15700 870 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 LILRB2Q8N423 598 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 DEFB123Q8N688 67 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 NDRG1Q92597 394 aaKnown RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 SNTG1Q9NSN8 517 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 FBXL17Q9UF56 701 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 CNTN6Q9UQ52 1028 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 RNF24Q9Y225 148 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ZFP37Q9Y6Q3 630 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 NUP153P49790 1475 aaKnown RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 ARVCFO00192 962 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 CHRNB2P17787 502 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 DRD1P21728 446 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 PLCXD2Q0VAA5 305 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 CARFQ8N187 725 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 MAFIPQ8WZ33 124 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 FAM3CQ92520 227 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 SCP2D1Q9UJQ7 156 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 CHD4Q14839 1912 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 F6UZH7 168 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 GPR25O00155 361 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 SGPL1O95470 568 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 MT-CO1P00395 513 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 SFTPCP11686 197 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 HLA-DMAP28067 261 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 TACR3P29371 465 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 DNASE1L3Q13609 305 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 GPR68Q15743 365 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 GLT8D1Q68CQ7 371 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 SH3RF2Q8TEC5 729 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 CEP295NLQ96MC4 621 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 OR2M4Q96R27 311 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 UBE2J1Q9Y385 318 aaPredicted RBP3.34□□□□□ -1.88
NEB-201ENST00000172853 BBIP1A8MTZ0 92 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 BTNL10A8MVZ5 291 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 AXIN1O15169 862 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 MRPL21Q7Z2W9 205 aaKnown RBP3.34□□□□□ -1.88
NEB-201ENST00000172853 GALNT5Q7Z7M9 940 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 GPR65Q8IYL9 337 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 ARL14EPQ8N8R7 260 aaPredicted RBP3.34□□□□□ -1.88
NEB-201ENST00000172853 ANKLE1Q8NAG6 615 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 LRRN3Q9H3W5 708 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 SCPEP1Q9HB40 452 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 TREM1Q9NP99 234 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 GJB4Q9NTQ9 266 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 MLXQ9UH92 298 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 KIDINS220Q9ULH0 1771 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 SPP1P10451 314 aa3.34□□□□□ -1.88
NEB-201ENST00000172853 LEPRP48357 1165 aaKnown RBP3.34□□□□□ -1.88
NEB-201ENST00000172853 GSK3BP49841 420 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms