RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Igkv15-103A0A140T8P3 115 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Cyp2d37-psF6YKB5 150 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 EmdO08579 259 aaKnown RBP9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ift81O35594 676 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 CfpP11680 464 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 MagP20917 626 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gm1123Q1RME4 390 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Rars2Q3U186 578 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Mapkapk3Q3UMW7 384 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ankub1Q3UUE9 192 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Khdrbs1Q60749 443 aaKnown RBP9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 MertkQ60805 994 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Atp4aQ64436 1033 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Serpina12Q7TMF5 413 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Olfr1134Q7TR43 312 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Rhox11Q810N8 206 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ppp1r3bQ8C767 284 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Stbd1Q8C7E7 338 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 C1rbQ8CFG9 706 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Fis1Q9CQ92 152 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Paip2Q9D6V8 124 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 AnkhQ9JHZ2 492 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Slamf1Q9QUM4 343 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Adam18Q9R157 719 aa9.5□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Col27a1Q5QNQ9 1845 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Cytl1A1E5L0 139 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gm340F6RGI3 1242 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 BrafP28028 804 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Aqp4P55088 323 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 SctQ08535 133 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Nkx6-3Q3UHX8 262 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Pfdn4Q3UWL8 134 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 MogQ61885 246 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Agfg2Q80WC7 479 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 TpbglQ8C013 384 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Dnm1lQ8K1M6 742 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ints14Q8R3P6 515 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Camk2gQ923T9 529 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Mcm8Q9CWV1 833 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 EqtnQ9D9V2 337 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Dennd6bQ9D9V7 585 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Sae1Q9R1T2 350 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Bod1lE9Q6J5 3032 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gm28360A0A087WR25 190 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gm35315A0A1B0GRI2 571 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gm14295A2BG91 834 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Clec2lP0C7M9 211 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 RxrgP28705 463 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Tead1P30051 426 aaKnown RBP9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 CapzbP47757 277 aaKnown RBP9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 AcadlP51174 430 aaKnown RBP9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Slc1a5P51912 553 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 PctpP53808 214 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Krt2Q3TTY5 707 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Szrd1Q6NXN1 152 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Poglut1Q8BYB9 392 aaKnown RBP9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Tprg1Q8CB49 279 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Lrif1Q8CDD9 755 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Acsm2Q8K0L3 575 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Krcc1Q99JT5 256 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Scd3Q99PL7 359 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Prelid3bQ9CYY7 195 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Fam96aQ9DCL2 160 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Slc19a2Q9EQN9 498 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Entpd5Q9WUZ9 427 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Sdk2Q6V4S5 2176 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gm5938A2AEN9 163 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Tnfrsf25B1AWN9 411 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 CK137956B1AYM9 596 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gm14139F6ZS36 494 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Zfp934K7N6H3 473 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 EllO08856 602 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 UgdhO70475 493 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Tgfbr3O88393 850 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Akr1b7P21300 316 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Lrrc3P59034 257 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Slc9a3r1P70441 355 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Dab1P97318 588 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Defb46Q4QY34 57 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Hspb6Q5EBG6 162 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 C2cd4cC2CD4Q5HZI2 419 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Itga2Q62469 1178 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Cdh24Q6PFX6 781 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Kirrel2Q7TSU7 700 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Mfn1Q811U4 741 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Edem2Q8BJT9 577 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Mrpl22Q8BU88 206 aaKnown RBP9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Ccdc90bQ8C3X2 256 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Arhgap24Q8C4V1 747 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Polr1eQ8K202 482 aaKnown RBP9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 NclnQ8VCM8 563 aaKnown RBP9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Olfr441Q8VFS5 310 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Rabep2Q91WG2 554 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Yipf2Q99LP8 312 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Chchd2Q9D1L0 153 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Clca3a2Q9EQR4 902 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Cts8Q9JI81 333 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Actl7bQ9QY83 418 aa9.49□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 9930021J03RikH3BKP8 2027 aa9.48□□□□□ -0.89
Ccdc38-201ENSMUST00000092215 Gm2832F7AEC7 200 aa9.48□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms