RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 RAB8AP61006 207 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 OCA2Q04671 838 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 RGS1Q08116 209 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 TOR1AIP1Q5JTV8 583 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 METTL2BQ6P1Q9 378 aaKnown RBP25.27■■□□□ 1.64
VEGFA-231ENST00000640499 APLFQ8IW19 511 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-231ENST00000640499 YIPF2Q9BWQ6 316 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 MKKSQ9NPJ1 570 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-231ENST00000640499 HCN3Q9P1Z3 774 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 NXT1Q9UKK6 140 aaKnown RBP25.27■■□□□ 1.64
VEGFA-231ENST00000640499 PCTPQ9UKL6 214 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 TMCO1Q9UM00 188 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 HS3ST3B1Q9Y662 390 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 BSNQ9UPA5 3926 aa25.27■■□□□ 1.64
VEGFA-231ENST00000640499 KALRNO60229 2985 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 LRIT2A6NDA9 550 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 ARGFXA6NJG6 315 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 SOCS6O14544 535 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 PRPF4O43172 522 aaKnown RBP eCLIP25.26■■□□□ 1.635e-8■■■□□ 16
VEGFA-231ENST00000640499 DLX3O60479 287 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 CLEC3AO75596 197 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 BMP10O95393 424 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 RPS17P08708 135 aaKnown RBP25.26■■□□□ 1.63
VEGFA-231ENST00000640499 MMP11P24347 488 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 LAPTM5Q13571 262 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 ADPRMQ3LIE5 342 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 DEFB134Q4QY38 66 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 RPS27LQ71UM5 84 aaKnown RBP25.26■■□□□ 1.63
VEGFA-231ENST00000640499 RAB43Q86YS6 212 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 LAS2Q8IYD9 372 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 MS4A6EQ96DS6 147 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 SEC16BQ96JE7 1060 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 IPPKQ9H8X2 491 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 ACSS2Q9NR19 701 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 BOD1L1Q8NFC6 3051 aa25.26■■□□□ 1.63
VEGFA-231ENST00000640499 A0A1B0GTL3 188 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 TLDC2A0PJX2 215 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 PPP6CO00743 305 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 SMIM24O75264 130 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 PRB1P04280 392 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 GSTA1P08263 222 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 KRT15P19012 456 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 HERC3Q15034 1050 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 GRHL2Q6ISB3 625 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 KIRREL2Q6UWL6 708 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 CNPY4Q8N129 248 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 TTLQ8NG68 377 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 OR52B6Q8NGF0 335 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 OR51Q1Q8NH59 317 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 ZNF473Q8WTR7 871 aaKnown RBP25.25■■□□□ 1.63
VEGFA-231ENST00000640499 ARHGAP9Q9BRR9 750 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 C1QTNF3Q9BXJ4 246 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 C12orf65Q9H3J6 166 aaKnown RBP25.25■■□□□ 1.63
VEGFA-231ENST00000640499 NOL11Q9H8H0 719 aaKnown RBP25.25■■□□□ 1.63
VEGFA-231ENST00000640499 P4HTMQ9NXG6 502 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 DCDC2Q9UHG0 476 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 ANGPTL3Q9Y5C1 460 aa25.25■■□□□ 1.63
VEGFA-231ENST00000640499 OR2W5A6NFC9 320 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 C1QL1O75973 258 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 GSTM2P28161 218 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 OLR1P78380 273 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 SLC18A2Q05940 514 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 PAGE2BQ5JRK9 111 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 FAM219BQ5XKK7 198 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 RNF175Q8N4F7 328 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 L3MBTL4Q8NA19 623 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 OR7G3Q8NG95 312 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 ZNF483Q8TF39 744 aaPredicted RBP25.24■■□□□ 1.63
VEGFA-231ENST00000640499 CRB3Q9BUF7 120 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 ING2Q9H160 280 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 LGALS13Q9UHV8 139 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 C3orf18Q9UK00 162 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 RNF11Q9Y3C5 154 aa25.24■■□□□ 1.63
VEGFA-231ENST00000640499 K7EM74 188 aa25.23■■□□□ 1.63
VEGFA-231ENST00000640499 UNC50Q53HI1 259 aa25.23■■□□□ 1.63
VEGFA-231ENST00000640499 LIPJQ5W064 366 aa25.23■■□□□ 1.63
VEGFA-231ENST00000640499 MED27Q6P2C8 311 aa25.23■■□□□ 1.63
VEGFA-231ENST00000640499 UBE3DQ7Z6J8 389 aa25.23■■□□□ 1.63
VEGFA-231ENST00000640499 NACC2Q96BF6 587 aa25.23■■□□□ 1.63
VEGFA-231ENST00000640499 QRFPRQ96P65 431 aa25.23■■□□□ 1.63
VEGFA-231ENST00000640499 CDK15Q96Q40 435 aa25.23■■□□□ 1.63
VEGFA-231ENST00000640499 SEMA3GQ9NS98 782 aa25.23■■□□□ 1.63
VEGFA-231ENST00000640499 C14orf105Q9NVL8 296 aa25.23■■□□□ 1.63
VEGFA-231ENST00000640499 PLAAQ9Y263 795 aa25.23■■□□□ 1.63
VEGFA-231ENST00000640499 NUP210LQ5VU65 1888 aa25.23■■□□□ 1.63
VEGFA-231ENST00000640499 A0A0G2JN53 185 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 ANKDD1BA6NHY2 528 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 IDSB3KWA1 339 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 CHST10O43529 356 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 EMP2P54851 167 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 CDH13P55290 713 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 TRAF3Q13114 568 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 KCNAB2Q13303 367 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 HIST2H2ACQ16777 129 aaPredicted RBP25.22■■□□□ 1.63
VEGFA-231ENST00000640499 HIST2H2AA3Q6FI13 130 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 ABHD13Q7L211 337 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 C4orf33Q8N1A6 199 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 AMER2Q8N7J2 671 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 CCT6BQ92526 530 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 ABHD17AQ96GS6 310 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms