RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 ENTPD2Q9Y5L3 495 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 KIR2DS5A0A0G2JLQ3 304 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 A0A0G2JNG1 304 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 HEATR9A2RTY3 570 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 KIR2DS3K7RE56 304 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 GRID2O43424 1007 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 USP12O75317 370 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 ERVK-10P10266 1014 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 ZNF182P17025 639 aaPredicted RBP8.34□□□□□ -1.07
GTF2I-219ENST00000621040 MGAT1P26572 445 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 GNPDA1P46926 289 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 CTSCP53634 463 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 COPZ1P61923 177 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 NFE2L1Q14494 772 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 KIR2DS5Q14953 304 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 CLVS2Q5SYC1 327 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 FAM83HQ6ZRV2 1179 aaPredicted RBP8.34□□□□□ -1.07
GTF2I-219ENST00000621040 LRRTM4Q86VH4 590 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 PIANPQ8IYJ0 282 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 ARL14Q8N4G2 192 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 ZDHHC1Q8WTX9 485 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 CCDC74AQ96AQ1 378 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 DPYSL5Q9BPU6 564 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 IL22Q9GZX6 179 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 IFT22Q9H7X7 185 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 CAB39LQ9H9S4 337 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 ASCL3Q9NQ33 180 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 ZDHHC3Q9NYG2 299 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 TXNDC16Q9P2K2 825 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 CDYLQ9Y232 598 aa8.34□□□□□ -1.07
GTF2I-219ENST00000621040 ZCWPW2A0A1B0GU75 182 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 C7orf72A4D263 438 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 D6RAR5 112 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 B4GAT1O43505 415 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 CCNA2P20248 432 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 GSTM2P28161 218 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 CD1CP29017 333 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 EVI2BP34910 448 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 OPRL1P41146 370 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 RPIAP49247 311 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 SESN2P58004 480 aaPredicted RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 RAB39AQ14964 217 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 PGS1Q32NB8 556 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 PCID2Q5JVF3 399 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 TCHHL1Q5QJ38 904 aaPredicted RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 WDR74Q6RFH5 385 aaPredicted RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 EPGNQ6UW88 154 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 BNC2Q6ZN30 1099 aaPredicted RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 ZNF574Q6ZN55 896 aaPredicted RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 ZC3H7AQ8IWR0 971 aaKnown RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 CNTN4Q8IWV2 1026 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 CHCHD4Q8N4Q1 142 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 HMGCLL1Q8TB92 370 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 BLOC1S5Q8TDH9 187 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 LRRC39Q96DD0 335 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 ZNF624Q9P2J8 865 aaPredicted RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 COPG2Q9UBF2 871 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 PKP3Q9Y446 797 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 ITPR1Q14643 2758 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 PPM1DO15297 605 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 FFAR2O15552 330 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 PAHP00439 452 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 CAPN1P07384 714 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 F3P13726 295 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 CSF2RBP32927 897 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 CASP3P42574 277 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 POLR2GP62487 172 aaKnown RBP eCLIP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 MS4A2Q01362 244 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 PMS2P3Q13401 168 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 HERC3Q15034 1050 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 IGSF11Q5DX21 431 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 ZNF648Q5T619 568 aaPredicted RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 HES3Q5TGS1 186 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 LYPLAL1Q5VWZ2 237 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 EFL1Q7Z2Z2 1120 aaKnown RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 AVL9Q8NBF6 648 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 SNIP1Q8TAD8 396 aaKnown RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 SH3KBP1Q96B97 665 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 CCDC3Q9BQI4 270 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 MENTQ9BUN1 341 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 EFHD1Q9BUP0 239 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 SPRY4Q9C004 299 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 OR52A5Q9H2C5 316 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 BPIFA1Q9NP55 256 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 CACNA1GO43497 2377 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 SNPHO15079 494 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 CASC3O15234 703 aaKnown RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 BCL10O95999 233 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 CHRNGP07510 517 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 AK4P27144 223 aaPredicted RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 MSX2P35548 267 aaPredicted RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 GRIA3P42263 894 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 LEPRP48357 1165 aaKnown RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 CDKN1CP49918 316 aaPredicted RBP8.33□□□□□ -1.08
GTF2I-219ENST00000621040 SNTA1Q13424 505 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 C1orf61Q13536 156 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 PXDC1Q5TGL8 231 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 GPR107Q5VW38 600 aa8.33□□□□□ -1.08
GTF2I-219ENST00000621040 KIAA0930Q6ICG6 404 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms