RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 TACR1P25103 407 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 AVPR1BP47901 424 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 HK3P52790 923 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 SOX4Q06945 474 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 PPIGQ13427 754 aaKnown RBP eCLIP9.43□□□□□ -0.95e-8■■■■□ 23.6
TNFAIP3-210ENST00000620204 LARS2Q15031 903 aaKnown RBP9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 PTPRRQ15256 657 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 ANGPT1Q15389 498 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 ZBTB37Q5TC79 503 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 PAQR6Q6TCH4 344 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 B3GLCTQ6Y288 498 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 FAM92BQ6ZTR7 304 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 ANKS3Q6ZW76 656 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 CRELD1Q96HD1 420 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 NIPSNAP1Q9BPW8 284 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 RBCK1Q9BYM8 510 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 ARHGAP39Q9C0H5 1083 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 ABHD16BQ9H3Z7 469 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 CCSER2Q9H7U1 834 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 PAK6Q9NQU5 681 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 NCKAP1Q9Y2A7 1128 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 YARS2Q9Y2Z4 477 aaKnown RBP9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 GABRDO14764 452 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 MUSKO15146 869 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 LDB2O43679 373 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 SMPD1P17405 629 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 GGT2P36268 569 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 ATP6V1E1P36543 226 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 SCNN1AP37088 669 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 RRAS2P62070 204 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 SEMA3BQ13214 749 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 MAD2L1Q13257 205 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 CRHR2Q13324 411 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 BRAT1Q6PJG6 821 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 MBOAT1Q6ZNC8 495 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 SYT12Q8IV01 421 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 GDPD1Q8N9F7 314 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 NARS2Q96I59 477 aaKnown RBP9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 CCDC115Q96NT0 180 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 MS4A7Q9GZW8 240 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 RETREG1Q9H6L5 497 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 MAGIXQ9H6Y5 334 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 TBC1D17Q9HA65 648 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 DLGAP4Q9Y2H0 992 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 ACTL7AQ9Y615 435 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 TTC3P53804 2025 aa9.43□□□□□ -0.9
TNFAIP3-210ENST00000620204 DNAH12Q6ZR08 3092 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 ARPC4-TTLL3A0A0A6YYG9 625 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 E2F3O00716 465 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 SHOXO15266 292 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 C22orf31O95567 290 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 CPN2P22792 545 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 PSPHP78330 225 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 BCL2L1Q07817 233 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 RGS1Q08116 209 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 VMACQ2NL98 169 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 TRIM71Q2Q1W2 868 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 ATG9BQ674R7 924 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 SLC27A1Q6PCB7 646 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 CNIH2Q6PI25 160 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 RNF130Q86XS8 419 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 SMG7Q92540 1137 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 NELL1Q92832 810 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 HRASLS5Q96KN8 279 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 SLC2A13Q96QE2 648 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 ZNF382Q96SR6 550 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.42□□□□□ -0.92e-9■■■■■ 37.4
TNFAIP3-210ENST00000620204 MRPL39Q9NYK5 338 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 FKBPLQ9UIM3 349 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 DOCK3Q8IZD9 2030 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 CASTOR2A6NHX0 329 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 ELNP15502 786 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 MC4RP32245 332 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 CNR2P34972 360 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 MAP2K6P52564 334 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 ARHGDIBP52566 201 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 VSX2P58304 361 aaPredicted RBP9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 TWF1Q12792 350 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 COX10Q12887 443 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 P2RY14Q15391 338 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 SF1Q15637 639 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 FAM110CQ1W6H9 321 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 EXOC3L2Q2M3D2 409 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 KIAA0319Q5VV43 1072 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 XKRXQ6PP77 449 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 CASP12Q6UXS9 341 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 PAQR9Q6ZVX9 377 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 ZNF367Q7RTV3 350 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 PDZD3Q86UT5 571 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 CLECL1Q8IZS7 167 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 CLDN19Q8N6F1 224 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 GTPBP2Q9BX10 602 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 NIPAL2Q9H841 368 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 TLR8Q9NR97 1041 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 HEBP1Q9NRV9 189 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 FAM105AQ9NUU6 356 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 KLK4Q9Y5K2 254 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 V9GYH0 126 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 ZNF638Q14966 1978 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 C2orf81A6NN90 581 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms