RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 OR9I1Q8NGQ6 314 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 GPR22Q99680 433 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 KDM3BQ7LBC6 1761 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 MITFO75030 526 aaPredicted RBP13.35□□□□□ -0.27
CHD1-212ENST00000614616 ERAL1O75616 437 aaKnown RBP13.35□□□□□ -0.27
CHD1-212ENST00000614616 GOT2P00505 430 aaKnown RBP13.35□□□□□ -0.27
CHD1-212ENST00000614616 ALPPP05187 535 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 CTSHP09668 335 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 PUS10Q3MIT2 529 aaKnown RBP13.35□□□□□ -0.27
CHD1-212ENST00000614616 CYBRD1Q53TN4 286 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 SLC51AQ86UW1 340 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 OR4K2Q8NGD2 314 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 A8MX80 341 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 H7C1Q1 480 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 SNNO75324 88 aaPredicted RBP13.35□□□□□ -0.27
CHD1-212ENST00000614616 SLC34A2O95436 690 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 ALDOBP05062 364 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 ATXN1P54253 815 aaKnown RBP13.35□□□□□ -0.27
CHD1-212ENST00000614616 ARFRP1Q13795 201 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 FAM46CQ5VWP2 391 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 PXKQ7Z7A4 578 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 DDX1Q92499 740 aaKnown RBP13.35□□□□□ -0.27
CHD1-212ENST00000614616 SGCDQ92629 289 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 ATG10Q9H0Y0 220 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 MRM3Q9HC36 420 aaKnown RBP13.35□□□□□ -0.27
CHD1-212ENST00000614616 NLGN3Q9NZ94 848 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 IL37Q9NZH6 218 aa13.35□□□□□ -0.27
CHD1-212ENST00000614616 CNTRLQ7Z7A1 2325 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 A8MT66 165 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 SOX30O94993 753 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 RENP00797 406 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 S100A8P05109 93 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 CKMP06732 381 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 CHATP28329 748 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 SERPINF1P36955 418 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 HSPB3Q12988 150 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 ZNF676Q8N7Q3 588 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 SLC25A51Q9H1U9 297 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 SOX17Q9H6I2 414 aaPredicted RBP13.34□□□□□ -0.27
CHD1-212ENST00000614616 NT5DC2Q9H857 520 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 SPG21Q9NZD8 308 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 C3P01024 1663 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 TTLL8A6PVC2 850 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 C4BPAP04003 597 aaKnown RBP13.34□□□□□ -0.27
CHD1-212ENST00000614616 CDK2P24941 298 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 SLC5A2P31639 672 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 PAN3Q58A45 887 aaKnown RBP13.34□□□□□ -0.27
CHD1-212ENST00000614616 OTOP3Q7RTS5 596 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 ZNF565Q8N9K5 539 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 SGTBQ96EQ0 304 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 NECAB3Q96P71 396 aaPredicted RBP13.34□□□□□ -0.27
CHD1-212ENST00000614616 DNMT3LQ9UJW3 386 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 PCDHB5Q9Y5E4 795 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 CD163L1Q9NR16 1453 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 ATAD5Q96QE3 1844 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 SMAD9O15198 467 aaKnown RBP13.34□□□□□ -0.27
CHD1-212ENST00000614616 APBA3O96018 575 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 PRKACGP22612 351 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 OR12D2P58182 307 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 MAD2L1BPQ15013 274 aaPredicted RBP13.34□□□□□ -0.27
CHD1-212ENST00000614616 SLC36A3Q495N2 470 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 HACD4Q5VWC8 232 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 KIAA0930Q6ICG6 404 aaPredicted RBP13.34□□□□□ -0.27
CHD1-212ENST00000614616 FAM151AQ8WW52 585 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 MRPS31Q92665 395 aaKnown RBP13.34□□□□□ -0.27
CHD1-212ENST00000614616 CRAMP1Q96RY5 1269 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 PKP4Q99569 1192 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 MROQ9BYG7 248 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 SAGE1Q9NXZ1 904 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 TMX2Q9Y320 296 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 JUPP14923 745 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 ITPKAP23677 461 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 NUDT1P36639 197 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 SLC35B2Q8TB61 432 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 PTCH2Q9Y6C5 1203 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 TUBGCP6Q96RT7 1819 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 CAPN14A8MX76 684 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 H7C417 338 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 URODP06132 367 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 EIF4HQ15056 248 aaKnown RBP13.34□□□□□ -0.27
CHD1-212ENST00000614616 PEA15Q15121 130 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 NOL9Q5SY16 702 aaKnown RBP13.34□□□□□ -0.27
CHD1-212ENST00000614616 LCLAT1Q6UWP7 414 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 CCDC54Q8NEL0 328 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 RBPMSQ93062 196 aaKnown RBP13.34□□□□□ -0.27
CHD1-212ENST00000614616 OR2M2Q96R28 347 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 B3GNT2Q9NY97 397 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 MYLKQ15746 1914 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 ZNFX1Q9P2E3 1918 aaKnown RBP13.34□□□□□ -0.27
CHD1-212ENST00000614616 WNT7AO00755 349 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 FFAR2O15552 330 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 SLC7A4O43246 635 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 ATG13O75143 517 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 EPHB3P54753 998 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 ATG9BQ674R7 924 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 CNIH2Q6PI25 160 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 WASH2PQ6VEQ5 465 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 KDM1BQ8NB78 822 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 HRH3Q9Y5N1 445 aa13.34□□□□□ -0.27
CHD1-212ENST00000614616 M0R129 80 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms