RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 FAM92AA1XBS5 289 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 GOLGA8IPA6NC78 632 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 GOLGA8JA6NMD2 632 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 C10orf142B7Z368 130 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 HNRNPCL3B7ZW38 293 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 USP17L23D6RBM5 183 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 DFNA5O60443 496 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 HNRNPCL1O60812 293 aaKnown RBP5.15□□□□□ -1.59
CLIP1-207ENST00000536634 KRT36O76013 467 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 PENKP01210 267 aaPredicted RBP5.15□□□□□ -1.59
CLIP1-207ENST00000536634 HNRNPCL4P0DMR1 293 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 ATP1A3P13637 1013 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 CKMT2P17540 419 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 ACP1P24666 158 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 CDAP32320 146 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 ZNF132P52740 706 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 C21orf59P57076 290 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 RPS14P62263 151 aaKnown RBP5.15□□□□□ -1.59
CLIP1-207ENST00000536634 RBP5P82980 135 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 POU5F1Q01860 360 aaKnown RBP5.15□□□□□ -1.59
CLIP1-207ENST00000536634 POU3F1Q03052 451 aaPredicted RBP5.15□□□□□ -1.59
CLIP1-207ENST00000536634 SRSF6Q13247 344 aaKnown RBP5.15□□□□□ -1.59
CLIP1-207ENST00000536634 ILKQ13418 452 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 MAPRE1Q15691 268 aaKnown RBP5.15□□□□□ -1.59
CLIP1-207ENST00000536634 PLEKHA7Q6IQ23 1121 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 PAQR9Q6ZVX9 377 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 ZC3H3Q8IXZ2 948 aaKnown RBP5.15□□□□□ -1.59
CLIP1-207ENST00000536634 MUC20Q8N307 709 aaPredicted RBP5.15□□□□□ -1.59
CLIP1-207ENST00000536634 OR2T3Q8NH03 318 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 HPDLQ96IR7 371 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 CBWD1Q9BRT8 395 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 RAB34Q9BZG1 259 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 ELOVL4Q9GZR5 314 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 NACA2Q9H009 215 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 CSTL1Q9H114 145 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 ZHX3Q9H4I2 956 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 EVA1AQ9H8M9 152 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 BLOC1S4Q9NUP1 217 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 ELOVL2Q9NXB9 296 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 GTF2A1LQ9UNN4 478 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 VDAC3Q9Y277 283 aa5.15□□□□□ -1.59
CLIP1-207ENST00000536634 FAM47DPA6NHR8 397 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 LRRC53A6NM62 1247 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 TGFB1I1O43294 461 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 SDC3O75056 442 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 CSO75390 466 aaKnown RBP5.14□□□□□ -1.59
CLIP1-207ENST00000536634 BEST1O76090 585 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 RTN3O95197 1032 aaPredicted RBP5.14□□□□□ -1.59
CLIP1-207ENST00000536634 HOXB5P09067 269 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 DGKAP23743 735 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 GNL1P36915 607 aaPredicted RBP5.14□□□□□ -1.59
CLIP1-207ENST00000536634 PRPHP41219 470 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 FUT6P51993 359 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 HNRNPH2P55795 449 aaKnown RBP5.14□□□□□ -1.59
CLIP1-207ENST00000536634 ERVPABLB-1P60509 514 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 NCEH1Q6PIU2 408 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 CLEC18BQ6UXF7 455 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 ZNF720Q7Z2F6 126 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 SMIM29Q86T20 159 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 SFR1Q86XK3 245 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 ARMC8Q8IUR7 673 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 DUSP19Q8WTR2 217 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 C8orf76Q96K31 380 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 TBATAQ96M53 351 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 STRA6Q9BX79 667 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 C1QTNF5Q9BXJ0 243 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 FGFBP2Q9BYJ0 223 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 TMEM245Q9H330 911 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 ST6GALNAC4Q9H4F1 302 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 POLR1BQ9H9Y6 1135 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 NMUR1Q9HB89 426 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 GDF3Q9NR23 364 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 ERVK-11Q9UQG0 969 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 AAR2Q9Y312 384 aaKnown RBP5.14□□□□□ -1.59
CLIP1-207ENST00000536634 TACC2O95359 2948 aa5.14□□□□□ -1.59
CLIP1-207ENST00000536634 NYNRINQ9P2P1 1898 aaKnown RBP5.13□□□□□ -1.59
CLIP1-207ENST00000536634 ZFC3H1O60293 1989 aaKnown RBP5.13□□□□□ -1.59
CLIP1-207ENST00000536634 APCP25054 2843 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 TLR4O00206 839 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 BMPR1BO00238 502 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 CASC3O15234 703 aaKnown RBP5.13□□□□□ -1.59
CLIP1-207ENST00000536634 XPNPEP2O43895 674 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 TBCAO75347 108 aaKnown RBP5.13□□□□□ -1.59
CLIP1-207ENST00000536634 TIPRLO75663 272 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 UMODP07911 640 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 HLA-DOBP13765 273 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 ARL1P40616 181 aaPredicted RBP5.13□□□□□ -1.59
CLIP1-207ENST00000536634 RXRGP48443 463 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 CLCNKAP51800 687 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 RAD23BP54727 409 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 GALCP54803 685 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 RELQ04864 619 aaPredicted RBP5.13□□□□□ -1.59
CLIP1-207ENST00000536634 ARL16Q0P5N6 197 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 GSTA3Q16772 222 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 ZSCAN23Q3MJ62 389 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 GGNBP1Q5YKI7 109 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 METTL2BQ6P1Q9 378 aaKnown RBP5.13□□□□□ -1.59
CLIP1-207ENST00000536634 FAM122CQ6P4D5 195 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 GFRALQ6UXV0 394 aa5.13□□□□□ -1.59
CLIP1-207ENST00000536634 PQLC2Q6ZP29 291 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms