RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	PRMT1	Q99873	361 aa	Known RBP	3.91	□□□□□ -1.78
CTNNA1-222	ENST00000520400	TBC1D13	Q9NVG8	400 aa		3.91	□□□□□ -1.78
CTNNA1-222	ENST00000520400	ASIC3	Q9UHC3	531 aa		3.91	□□□□□ -1.78
CTNNA1-222	ENST00000520400	AGTPBP1	Q9UPW5	1226 aa		3.91	□□□□□ -1.78
CTNNA1-222	ENST00000520400	PA2G4	Q9UQ80	394 aa	Known RBP	3.91	□□□□□ -1.78
CTNNA1-222	ENST00000520400	ARHGAP35	Q9NRY4	1499 aa		3.91	□□□□□ -1.78
CTNNA1-222	ENST00000520400	IL16	Q14005	1332 aa		3.91	□□□□□ -1.78
CTNNA1-222	ENST00000520400	KDM5B	Q9UGL1	1544 aa		3.9	□□□□□ -1.78
CTNNA1-222	ENST00000520400	TNIK	Q9UKE5	1360 aa		3.9	□□□□□ -1.78
CTNNA1-222	ENST00000520400	PCNX3	Q9H6A9	2034 aa		3.9	□□□□□ -1.78
CTNNA1-222	ENST00000520400	CLIP1	P30622	1438 aa		3.9	□□□□□ -1.78
CTNNA1-222	ENST00000520400	TRAPPC8	Q9Y2L5	1435 aa		3.9	□□□□□ -1.78
CTNNA1-222	ENST00000520400	MEX3A	A1L020	520 aa	Known RBP	3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	ILVBL	A1L0T0	632 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	C15orf61	A6NNL5	157 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	KBTBD13	C9JR72	458 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400		G3V2L1	256 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	TTI1	O43156	1089 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	TLX2	O43763	284 aa	Predicted RBP	3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	LRCH4	O75427	683 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	KRT33A	O76009	404 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	GOSR1	O95249	250 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	GH1	P01241	217 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	C9	P02748	559 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	ZSCAN5DP	P0CG00	497 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	SERPINB6	P35237	376 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	DCDC1	P59894	354 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	ST8SIA6	P61647	398 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	SNRPD1	P62314	119 aa	Known RBP	3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	FKBP1B	P68106	108 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	ASIC1	P78348	528 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	CDH18	Q13634	790 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	ITGA9	Q13797	1035 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	EFTUD2	Q15029	972 aa	Known RBP eCLIP	3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	DUSP5	Q16690	384 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	ZFP69	Q49AA0	526 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	IYD	Q6PHW0	289 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	COX8C	Q7Z4L0	72 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	DEFB132	Q7Z7B7	95 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	ANKRD46	Q86W74	232 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	SNX32	Q86XE0	403 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	NAT8L	Q8N9F0	302 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	RNASE8	Q8TDE3	154 aa	Known RBP	3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	TSSK2	Q96PF2	358 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	PANX3	Q96QZ0	392 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	MTMR12	Q9C0I1	747 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	P2RY12	Q9H244	342 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	UBQLN3	Q9H347	655 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	PPAN	Q9NQ55	473 aa	Known RBP	3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	PNPLA3	Q9NST1	481 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	PANK4	Q9NVE7	773 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	DNAJC17	Q9NVM6	304 aa	Known RBP	3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	HACD3	Q9P035	362 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	KLHL8	Q9P2G9	620 aa	Predicted RBP	3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	GMEB2	Q9UKD1	530 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	POMT2	Q9UKY4	750 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	PPP1R3C	Q9UQK1	317 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	CACNA1F	O60840	1977 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	UHRF1BP1L	A0JNW5	1464 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	TCOF1	Q13428	1488 aa	Known RBP	3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	EFCAB5	A4FU69	1503 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	ARHGEF12	Q9NZN5	1544 aa		3.9	□□□□□ -1.79
CTNNA1-222	ENST00000520400	ABCA8	O94911	1581 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	CEP162	Q5TB80	1403 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	LRP6	O75581	1613 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400		A0A087WZ39	114 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	NPIPB9	F8W1W9	429 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	NPIPA3	F8WFD2	350 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	MAGEB2	O15479	319 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	STX6	O43752	255 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	MAGEC1	O60732	1142 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	SOCS5	O75159	536 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	MT-ND2	P03891	347 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	ELAVL4	P26378	380 aa	Known RBP	3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	GJB2	P29033	226 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	SOAT1	P35610	550 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	CETN2	P41208	172 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	SLC6A12	P48065	614 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	NPBWR1	P48145	328 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	GUCY2D	Q02846	1103 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	HYAL1	Q12794	435 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	DRP2	Q13474	957 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	GLRA4	Q5JXX5	417 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	GFI1B	Q5VTD9	330 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	C11orf88	Q6PI97	169 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	TMEM270	Q6UE05	265 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	KCTD9	Q7L273	389 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	FCRLA	Q7L513	359 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	CCDC83	Q8IWF9	413 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	NUP93	Q8N1F7	819 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	FAM89B	Q8N5H3	189 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	TCEANC	Q8N8B7	351 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	NIPA2	Q8N8Q9	360 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	SMYD1	Q8NB12	490 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	ADAD2	Q8NCV1	583 aa	Known RBP	3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	ZNRF4	Q8WWF5	429 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	ZNF300	Q96RE9	604 aa	Predicted RBP	3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	CLEC7A	Q9BXN2	247 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	PANK2	Q9BZ23	570 aa		3.89	□□□□□ -1.79
CTNNA1-222	ENST00000520400	C10orf88	Q9H8K7	445 aa		3.89	□□□□□ -1.79

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