RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PTGES3Q15185 160 aaKnown RBP18.99■□□□□ 0.63
SDF4-205ENST00000465727 PTPRRQ15256 657 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 EXOC3L2Q2M3D2 409 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 MEDAGQ5VYS4 303 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 FRG2Q64ET8 278 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 CCDC149Q6ZUS6 474 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 CCDC28AQ8IWP9 274 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 CLECL1Q8IZS7 167 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 CLDN19Q8N6F1 224 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 VPS37AQ8NEZ2 397 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 FRG2BQ96QU4 278 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 TRIM39Q9HCM9 518 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 FLRT1Q9NZU1 646 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 KLHL42Q9P2K6 505 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 HCN4Q9Y3Q4 1203 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 C1orf226A1L170 272 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 ARRDC5A6NEK1 342 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 F8W810 466 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 CBX4O00257 560 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 GAPDHSO14556 408 aaPredicted RBP18.99■□□□□ 0.63
SDF4-205ENST00000465727 ZNF780AO75290 641 aaPredicted RBP18.99■□□□□ 0.63
SDF4-205ENST00000465727 CPN2P22792 545 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 AZGP1P25311 298 aaKnown RBP18.99■□□□□ 0.63
SDF4-205ENST00000465727 CSTF2P33240 577 aaKnown RBP eCLIP18.99■□□□□ 0.63
SDF4-205ENST00000465727 SLC11A2P49281 568 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 BEX3Q00994 111 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 TNK1Q13470 666 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 ELMOD2Q8IZ81 293 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 GPR152Q8TDT2 470 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 COQ8BQ96D53 544 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 TIGARQ9NQ88 270 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 KCTD5Q9NXV2 234 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 LSM2Q9Y333 95 aaKnown RBP18.99■□□□□ 0.63
SDF4-205ENST00000465727 Q9Y3F1 56 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 PIKFYVEQ9Y2I7 2098 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 HYKKA2RU49 373 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 ZAR1LA6NP61 321 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 PDE9AO76083 593 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 CTSHP09668 335 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 NUDT7P0C024 238 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 HNMTP50135 292 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 FAM189BP81408 668 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 LRRC74AQ0VAA2 488 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 WDR45BQ5MNZ6 344 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 FAM131AQ6UXB0 335 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 PTCHD4Q6ZW05 846 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 ZNF767PQ75MW2 155 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 FAM109AQ8N4B1 249 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 METTL2AQ96IZ6 378 aaKnown RBP18.98■□□□□ 0.63
SDF4-205ENST00000465727 MKRN2Q9H000 416 aaKnown RBP18.98■□□□□ 0.63
SDF4-205ENST00000465727 TOR4AQ9NXH8 423 aa18.98■□□□□ 0.63
SDF4-205ENST00000465727 ZNF865P0CJ78 1059 aaPredicted RBP18.97■□□□□ 0.63
SDF4-205ENST00000465727 HLA-EP13747 358 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 CRYBB2P43320 205 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 HMGA2P52926 109 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 PURAQ00577 322 aaKnown RBP18.97■□□□□ 0.63
SDF4-205ENST00000465727 TARDBPQ13148 414 aaKnown RBP eCLIP18.97■□□□□ 0.638e-8■■■■■ 67.4
SDF4-205ENST00000465727 LARS2Q15031 903 aaKnown RBP18.97■□□□□ 0.63
SDF4-205ENST00000465727 QPRTQ15274 297 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 TAB1Q15750 504 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 PDZK1Q5T2W1 519 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 BBS7Q8IWZ6 715 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 CLDN22Q8N7P3 220 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 B3GALT6Q96L58 329 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 DHRS9Q9BPW9 319 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 DUSP26Q9BV47 211 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 EBPLQ9BY08 206 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 C11orf54Q9H0W9 315 aaPredicted RBP18.97■□□□□ 0.63
SDF4-205ENST00000465727 SNTG1Q9NSN8 517 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 NDUFB11Q9NX14 153 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 SH3BP4Q9P0V3 963 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 RUVBL1Q9Y265 456 aaKnown RBP18.97■□□□□ 0.63
SDF4-205ENST00000465727 PCDHB9Q9Y5E1 797 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 TRPM7Q96QT4 1865 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.97■□□□□ 0.63
SDF4-205ENST00000465727 A0A0G2JMP0 313 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 OR6C70A6NIJ9 312 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 GCM2O75603 506 aaPredicted RBP18.97■□□□□ 0.63
SDF4-205ENST00000465727 IL1AP01583 271 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 ADRA2AP08913 450 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 AQP1P29972 269 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 IFNA8P32881 189 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 OR3A3P47888 321 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 GZMKP49863 264 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 CD83Q01151 205 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 ZNF177Q13360 481 aaPredicted RBP18.97■□□□□ 0.63
SDF4-205ENST00000465727 SPHARQ15513 63 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 GPR33Q49SQ1 333 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 ANXA8L1Q5VT79 327 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 CHST9Q7L1S5 443 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 ARMCX6Q7L4S7 300 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 CAMKMTQ7Z624 323 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 FAM46DQ8NEK8 389 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 OR9Q1Q8NGQ5 310 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 OR52J3Q8NH60 311 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 SLC25A46Q96AG3 418 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 MSLNLQ96KJ4 702 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 MND1Q9BWT6 205 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 MCOLN1Q9GZU1 580 aa18.97■□□□□ 0.63
SDF4-205ENST00000465727 FZD3Q9NPG1 666 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms