RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 RETSATQ6NUM9 610 aa13.37□□□□□ -0.27
UBE2D3-210ENST00000453744 BCDIN3DQ7Z5W3 292 aaKnown RBP13.37□□□□□ -0.27
UBE2D3-210ENST00000453744 GHDCQ8N2G8 530 aa13.37□□□□□ -0.27
UBE2D3-210ENST00000453744 FLCNQ8NFG4 579 aa13.37□□□□□ -0.27
UBE2D3-210ENST00000453744 IL17RDQ8NFM7 739 aa13.37□□□□□ -0.27
UBE2D3-210ENST00000453744 NLGN2Q8NFZ4 835 aa13.37□□□□□ -0.27
UBE2D3-210ENST00000453744 KIAA1522Q9P206 1035 aaPredicted RBP13.37□□□□□ -0.27
UBE2D3-210ENST00000453744 PCDHB8Q9UN66 801 aa13.37□□□□□ -0.27
UBE2D3-210ENST00000453744 SLC9A8Q9Y2E8 581 aa13.37□□□□□ -0.27
UBE2D3-210ENST00000453744 GSAPA4D1B5 854 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 PCDH17O14917 1159 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 WISP3O95389 354 aaPredicted RBP13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 IFNW1P05000 195 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 HOXB6P17509 224 aaKnown RBP13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 ATN1P54259 1190 aaPredicted RBP13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 PRKAG1P54619 331 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 SMAD3P84022 425 aaKnown RBP13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 LCN1P1Q5VSP4 162 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 AFMIDQ63HM1 303 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 DNAJB8Q8NHS0 232 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 PCNPQ8WW12 178 aaKnown RBP13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 SLC35A5Q9BS91 424 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 IL17CQ9P0M4 197 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 A0A1B0GVM2 712 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 A0A1W2PQL4 384 aaPredicted RBP13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 TRBC2A0A5B9 178 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 TLR4O00206 839 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 TLX2O43763 284 aaPredicted RBP13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 SLC2A2P11168 524 aaPredicted RBP13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 CDK10Q15131 360 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 SPHARQ15513 63 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 PRSS55Q6UWB4 352 aaPredicted RBP13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 DPY19L3Q6ZPD9 716 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 LIMS2Q7Z4I7 341 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 GALNT13Q8IUC8 556 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 OR8H3Q8N146 312 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 ZNF566Q969W8 418 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 CMTM7Q96FZ5 175 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 WACQ9BTA9 647 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 MAT2BQ9NZL9 334 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 CMAHPQ9Y471 501 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 SDK1Q7Z5N4 2213 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 RGPD3A6NKT7 1758 aaPredicted RBP13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 RGPD4Q7Z3J3 1758 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 MYADML2A6NDP7 307 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 TRIM64BA6NI03 449 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 TNFRSF10AO00220 468 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 PRLP01236 227 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 NR2F6P10588 404 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 CXCR2P25025 360 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 HOXA9P31269 272 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 SPAM1P38567 509 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 RECQLP46063 649 aaPredicted RBP13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 ZSWIM7Q19AV6 140 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 IER5LQ5T953 404 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 RFPL4BQ6ZWI9 263 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 OR5H6Q8NGV6 325 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 GSTK1Q9Y2Q3 226 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 PCDHGB1Q9Y5G3 927 aa13.36□□□□□ -0.27
UBE2D3-210ENST00000453744 KDELR3O43731 214 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 OR2B3O76000 313 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 SEMA3DO95025 777 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 C6orf47O95873 294 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 PRKAR1AP10644 381 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 UQCRC1P31930 480 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 GJA5P36382 358 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 ITGA1P56199 1179 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 PTGES3Q15185 160 aaKnown RBP13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 LINC00299Q6ZSB3 139 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 CBLL1Q75N03 491 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 TSPAN33Q86UF1 283 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 LAPTM4BQ86VI4 370 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 TMEM159Q96B96 161 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 PPCDCQ96CD2 204 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 HRASLS5Q96KN8 279 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 ZDHHC6Q9H6R6 413 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 SPATA2Q9UM82 520 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 TMEM88BA6NKF7 163 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 TGFB1P01137 390 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 RPS3P23396 243 aaKnown RBP eCLIP13.35□□□□□ -0.275e-12■□□□□ 9.4
UBE2D3-210ENST00000453744 RPS19P39019 145 aaKnown RBP13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 TARDBPQ13148 414 aaKnown RBP eCLIP13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 MAP2K5Q13163 448 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 WDR45BQ5MNZ6 344 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 TRIM40Q6P9F5 258 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 CELF5Q8N6W0 485 aaKnown RBP13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 OR6F1Q8NGZ6 308 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 C9orf43Q8TAL5 461 aaPredicted RBP13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 KLHL6Q8WZ60 621 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 POP5Q969H6 163 aaKnown RBP13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 SLC29A3Q9BZD2 475 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 UCK2Q9BZX2 261 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 CLEC2DQ9UHP7 191 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 ERVW-1Q9UQF0 538 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 RUVBL1Q9Y265 456 aaKnown RBP13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 HCN4Q9Y3Q4 1203 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 NUMA1Q14980 2115 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 A0A0U1RQF3 1178 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 RPS26P62854 115 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms