RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	MET7	Q08645	548 aa		5.19	□□□□□ -1.58
SPN1	YPR133C	EUG1	P32474	517 aa		5.18	□□□□□ -1.58
SPN1	YPR133C	NCL1	P38205	684 aa	Known RBP	5.18	□□□□□ -1.58
SPN1	YPR133C	MSC7	P38694	644 aa		5.18	□□□□□ -1.58
SPN1	YPR133C	YJR107W	P47145	328 aa		5.18	□□□□□ -1.58
SPN1	YPR133C	HEH2	Q03281	663 aa		5.18	□□□□□ -1.58
SPN1	YPR133C	TY1A-DR2	Q03964	440 aa	Known RBP	5.18	□□□□□ -1.58
SPN1	YPR133C	YDL124W	Q07551	312 aa	Known RBP	5.18	□□□□□ -1.58
SPN1	YPR133C	YDL144C	Q07589	356 aa		5.18	□□□□□ -1.58
SPN1	YPR133C	GPM1	P00950	247 aa	Known RBP	5.17	□□□□□ -1.58
SPN1	YPR133C	FUR4	P05316	633 aa	Known RBP	5.17	□□□□□ -1.58
SPN1	YPR133C	PER1	P25625	357 aa		5.17	□□□□□ -1.58
SPN1	YPR133C	BCS1	P32839	456 aa		5.17	□□□□□ -1.58
SPN1	YPR133C	KSP1	P38691	1029 aa	Known RBP	5.17	□□□□□ -1.58
SPN1	YPR133C	APM2	P38700	605 aa		5.17	□□□□□ -1.58
SPN1	YPR133C	TDA6	Q06466	467 aa		5.17	□□□□□ -1.58
SPN1	YPR133C	RRI2	Q12348	645 aa		5.17	□□□□□ -1.58
SPN1	YPR133C	PIF1	P07271	859 aa		5.16	□□□□□ -1.58
SPN1	YPR133C	KRS1	P15180	591 aa	Known RBP	5.16	□□□□□ -1.58
SPN1	YPR133C	VMA2	P16140	517 aa	Known RBP	5.16	□□□□□ -1.58
SPN1	YPR133C	RGT1	P32862	1170 aa		5.16	□□□□□ -1.58
SPN1	YPR133C	KTR2	P33550	425 aa		5.16	□□□□□ -1.58
SPN1	YPR133C	BOI1	P38041	980 aa	Known RBP	5.16	□□□□□ -1.58
SPN1	YPR133C	YHR131C	P38835	850 aa		5.16	□□□□□ -1.58
SPN1	YPR133C	TIF4631	P39935	952 aa	Known RBP	5.16	□□□□□ -1.58
SPN1	YPR133C	SBE2	P42223	864 aa	Known RBP	5.16	□□□□□ -1.58
SPN1	YPR133C	PIP2	P52960	996 aa		5.16	□□□□□ -1.58
SPN1	YPR133C	YNL193W	P53870	558 aa		5.16	□□□□□ -1.58
SPN1	YPR133C	YMR187C	Q03236	431 aa		5.16	□□□□□ -1.58
SPN1	YPR133C	YOR296W	Q08748	1289 aa		5.16	□□□□□ -1.58
SPN1	YPR133C	KNS1	P32350	737 aa	Predicted RBP	5.15	□□□□□ -1.59
SPN1	YPR133C	CST26	P38226	397 aa		5.15	□□□□□ -1.59
SPN1	YPR133C	GPB2	P39717	880 aa		5.15	□□□□□ -1.59
SPN1	YPR133C	BOL3	P39724	118 aa		5.15	□□□□□ -1.59
SPN1	YPR133C	YML037C	Q03703	340 aa		5.15	□□□□□ -1.59
SPN1	YPR133C	DUS4	Q06063	367 aa		5.15	□□□□□ -1.59
SPN1	YPR133C	LAP2	Q10740	671 aa		5.15	□□□□□ -1.59
SPN1	YPR133C	LSO1	Q3E827	93 aa		5.15	□□□□□ -1.59
SPN1	YPR133C	SBP1	P10080	294 aa	Known RBP	5.14	□□□□□ -1.59
SPN1	YPR133C	PDC5	P16467	563 aa	Known RBP	5.14	□□□□□ -1.59
SPN1	YPR133C	GIP1	P38229	639 aa		5.14	□□□□□ -1.59
SPN1	YPR133C	YNR040W	P53736	256 aa		5.14	□□□□□ -1.59
SPN1	YPR133C	CSI1	Q04368	295 aa		5.14	□□□□□ -1.59
SPN1	YPR133C	RPN7	Q06103	429 aa	Known RBP	5.14	□□□□□ -1.59
SPN1	YPR133C	KEL3	Q08979	651 aa	Predicted RBP	5.14	□□□□□ -1.59
SPN1	YPR133C	APC11	Q12157	165 aa		5.14	□□□□□ -1.59
SPN1	YPR133C	CYB2	P00175	591 aa		5.13	□□□□□ -1.59
SPN1	YPR133C	RPS19A	P07280	144 aa	Known RBP	5.13	□□□□□ -1.59
SPN1	YPR133C	RPS19B	P07281	144 aa	Predicted RBP	5.13	□□□□□ -1.59
SPN1	YPR133C	HEM3	P28789	327 aa		5.13	□□□□□ -1.59
SPN1	YPR133C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
SPN1	YPR133C	GRX7	P38068	203 aa		5.13	□□□□□ -1.59
SPN1	YPR133C	GRS1	P38088	690 aa	Known RBP	5.13	□□□□□ -1.59
SPN1	YPR133C	ISW1	P38144	1129 aa		5.13	□□□□□ -1.59
SPN1	YPR133C	MCX1	P38323	520 aa	Predicted RBP	5.13	□□□□□ -1.59
SPN1	YPR133C	HXT8	P40886	569 aa		5.13	□□□□□ -1.59
SPN1	YPR133C	YNR014W	P53719	212 aa		5.13	□□□□□ -1.59
SPN1	YPR133C	KAR5	Q04746	504 aa		5.13	□□□□□ -1.59
SPN1	YPR133C	MSN1	P22148	382 aa		5.12	□□□□□ -1.59
SPN1	YPR133C	PRE8	P23639	250 aa		5.12	□□□□□ -1.59
SPN1	YPR133C	FUN12	P39730	1002 aa	Known RBP	5.12	□□□□□ -1.59
SPN1	YPR133C	PRK1	P40494	810 aa		5.12	□□□□□ -1.59
SPN1	YPR133C	SUT1	P53032	299 aa	Known RBP	5.12	□□□□□ -1.59
SPN1	YPR133C	YAF9	P53930	226 aa		5.12	□□□□□ -1.59
SPN1	YPR133C	BUL2	Q03758	920 aa	Known RBP	5.12	□□□□□ -1.59
SPN1	YPR133C	YDR524C-B	Q3E6R4	66 aa		5.12	□□□□□ -1.59
SPN1	YPR133C	FKS1	P38631	1876 aa	Known RBP	5.11	□□□□□ -1.59
SPN1	YPR133C	RPB10	P22139	70 aa		5.11	□□□□□ -1.59
SPN1	YPR133C	NOC2	P39744	710 aa	Known RBP	5.11	□□□□□ -1.59
SPN1	YPR133C	HEM1	P09950	548 aa	Predicted RBP	5.1	□□□□□ -1.59
SPN1	YPR133C	IDI1	P15496	288 aa		5.1	□□□□□ -1.59
SPN1	YPR133C	SUI2	P20459	304 aa	Known RBP	5.1	□□□□□ -1.59
SPN1	YPR133C	SRM1	P21827	482 aa		5.1	□□□□□ -1.59
SPN1	YPR133C	RIF1	P29539	1916 aa		5.1	□□□□□ -1.59
SPN1	YPR133C	SRP40	P32583	406 aa	Predicted RBP	5.1	□□□□□ -1.59
SPN1	YPR133C	UTR4	P32626	227 aa		5.1	□□□□□ -1.59
SPN1	YPR133C	FAB1	P34756	2278 aa		5.1	□□□□□ -1.59
SPN1	YPR133C	TOM71	P38825	639 aa	Known RBP	5.1	□□□□□ -1.59
SPN1	YPR133C	SKP2	P42843	763 aa		5.1	□□□□□ -1.59
SPN1	YPR133C	YGR125W	P53273	1036 aa		5.1	□□□□□ -1.59
SPN1	YPR133C	SKG3	Q06315	1026 aa		5.1	□□□□□ -1.59
SPN1	YPR133C	SMC1	P32908	1225 aa		5.09	□□□□□ -1.59
SPN1	YPR133C	YKR018C	P36114	725 aa		5.09	□□□□□ -1.59
SPN1	YPR133C	MET1	P36150	593 aa		5.09	□□□□□ -1.59
SPN1	YPR133C	ALD6	P54115	500 aa	Known RBP	5.09	□□□□□ -1.59
SPN1	YPR133C	RMD1	Q03441	430 aa		5.09	□□□□□ -1.59
SPN1	YPR133C	YPL260W	Q08977	551 aa		5.09	□□□□□ -1.59
SPN1	YPR133C	TOR2	P32600	2474 aa	Known RBP	5.09	□□□□□ -1.59
SPN1	YPR133C	TOR1	P35169	2470 aa		5.08	□□□□□ -1.6
SPN1	YPR133C	YUR1	P26725	428 aa		5.08	□□□□□ -1.6
SPN1	YPR133C	STM1	P39015	273 aa	Known RBP	5.08	□□□□□ -1.6
SPN1	YPR133C	JHD1	P40034	492 aa		5.08	□□□□□ -1.6
SPN1	YPR133C	NTA1	P40354	457 aa		5.08	□□□□□ -1.6
SPN1	YPR133C	QDR1	P40475	563 aa		5.08	□□□□□ -1.6
SPN1	YPR133C	RGD2	P43556	714 aa		5.08	□□□□□ -1.6
SPN1	YPR133C	RSC8	P43609	557 aa	Known RBP	5.08	□□□□□ -1.6
SPN1	YPR133C	FOL2	P51601	243 aa	Known RBP	5.08	□□□□□ -1.6
SPN1	YPR133C	MSC6	Q08818	692 aa	Known RBP	5.08	□□□□□ -1.6
SPN1	YPR133C	RPP0	P05317	312 aa	Known RBP	5.07	□□□□□ -1.6
SPN1	YPR133C	SAM1	P10659	382 aa	Known RBP	5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 39 ms