RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	SAH1	P39954	449 aa	Known RBP	5.44	□□□□□ -1.54
CMR3	YPR013C	VPS53	P47061	822 aa		5.44	□□□□□ -1.54
CMR3	YPR013C	YDL121C	Q07541	149 aa		5.44	□□□□□ -1.54
CMR3	YPR013C	YEL1	P34225	687 aa		5.43	□□□□□ -1.54
CMR3	YPR013C	FUI1	P38196	639 aa		5.43	□□□□□ -1.54
CMR3	YPR013C	HSE1	P38753	452 aa		5.43	□□□□□ -1.54
CMR3	YPR013C	YAR028W	P39548	234 aa		5.43	□□□□□ -1.54
CMR3	YPR013C	SPO74	P45819	413 aa		5.43	□□□□□ -1.54
CMR3	YPR013C	COG6	P53959	839 aa		5.43	□□□□□ -1.54
CMR3	YPR013C	YMR265C	Q03508	461 aa	Known RBP	5.43	□□□□□ -1.54
CMR3	YPR013C	TRE2	Q08693	809 aa		5.43	□□□□□ -1.54
CMR3	YPR013C	DPH6	Q12429	685 aa		5.43	□□□□□ -1.54
CMR3	YPR013C	THS1	P04801	734 aa	Known RBP	5.42	□□□□□ -1.54
CMR3	YPR013C	CDC9	P04819	755 aa		5.42	□□□□□ -1.54
CMR3	YPR013C	TRX2	P22803	104 aa	Known RBP	5.42	□□□□□ -1.54
CMR3	YPR013C	HIR1	P32479	840 aa		5.42	□□□□□ -1.54
CMR3	YPR013C	YRO2	P38079	344 aa		5.42	□□□□□ -1.54
CMR3	YPR013C	PNT1	P38969	423 aa		5.42	□□□□□ -1.54
CMR3	YPR013C	GPP1	P41277	250 aa	Known RBP	5.42	□□□□□ -1.54
CMR3	YPR013C	PEX14	P53112	341 aa		5.42	□□□□□ -1.54
CMR3	YPR013C	SOK2	P53438	785 aa	Predicted RBP	5.42	□□□□□ -1.54
CMR3	YPR013C	SRP1	Q02821	542 aa	Known RBP	5.42	□□□□□ -1.54
CMR3	YPR013C	ATG16	Q03818	150 aa		5.42	□□□□□ -1.54
CMR3	YPR013C	TY1A-DR2	Q03964	440 aa	Known RBP	5.42	□□□□□ -1.54
CMR3	YPR013C	LCD1	Q04377	747 aa		5.42	□□□□□ -1.54
CMR3	YPR013C	AVO1	Q08236	1176 aa		5.42	□□□□□ -1.54
CMR3	YPR013C	YPL260W	Q08977	551 aa		5.42	□□□□□ -1.54
CMR3	YPR013C	YLL054C	Q12244	843 aa		5.42	□□□□□ -1.54
CMR3	YPR013C	SRD1	P09007	221 aa		5.41	□□□□□ -1.54
CMR3	YPR013C	RET1	P22276	1149 aa	Known RBP	5.41	□□□□□ -1.54
CMR3	YPR013C	NFS1	P25374	497 aa		5.41	□□□□□ -1.54
CMR3	YPR013C	SPC29	P33419	253 aa		5.41	□□□□□ -1.54
CMR3	YPR013C	MDJ1	P35191	511 aa		5.41	□□□□□ -1.54
CMR3	YPR013C	YFL066C	P43538	392 aa		5.41	□□□□□ -1.54
CMR3	YPR013C	MTQ2	Q03920	221 aa	Predicted RBP	5.41	□□□□□ -1.54
CMR3	YPR013C	RPL11A	P0C0W9	174 aa	Known RBP	5.4	□□□□□ -1.54
CMR3	YPR013C	YER152C	P10356	443 aa		5.4	□□□□□ -1.54
CMR3	YPR013C	RAD18	P10862	487 aa		5.4	□□□□□ -1.54
CMR3	YPR013C	PEA2	P40091	420 aa		5.4	□□□□□ -1.54
CMR3	YPR013C	YRB30	P53107	440 aa	Predicted RBP	5.4	□□□□□ -1.54
CMR3	YPR013C	MET13	P53128	600 aa		5.4	□□□□□ -1.54
CMR3	YPR013C	RPL11B	Q3E757	174 aa	Predicted RBP	5.4	□□□□□ -1.54
CMR3	YPR013C	YEF3	P16521	1044 aa	Known RBP	5.39	□□□□□ -1.55
CMR3	YPR013C	SFL1	P20134	766 aa		5.39	□□□□□ -1.55
CMR3	YPR013C	PCL2	P25693	308 aa		5.39	□□□□□ -1.55
CMR3	YPR013C	QNS1	P38795	714 aa	Known RBP	5.39	□□□□□ -1.55
CMR3	YPR013C	GIP2	P40036	548 aa		5.39	□□□□□ -1.55
CMR3	YPR013C	ICP55	P40051	511 aa		5.39	□□□□□ -1.55
CMR3	YPR013C	LYS5	P50113	272 aa		5.39	□□□□□ -1.55
CMR3	YPR013C	TGL2	P54857	326 aa		5.39	□□□□□ -1.55
CMR3	YPR013C	ADE12	P80210	433 aa	Known RBP	5.39	□□□□□ -1.55
CMR3	YPR013C	COG8	Q04632	607 aa		5.39	□□□□□ -1.55
CMR3	YPR013C	ALG6	Q12001	544 aa	Known RBP	5.39	□□□□□ -1.55
CMR3	YPR013C	SPO21	Q12411	609 aa		5.39	□□□□□ -1.55
CMR3	YPR013C	SST2	P11972	698 aa	Known RBP	5.38	□□□□□ -1.55
CMR3	YPR013C	DBP2	P24783	546 aa	Known RBP	5.38	□□□□□ -1.55
CMR3	YPR013C	PLC1	P32383	869 aa		5.38	□□□□□ -1.55
CMR3	YPR013C	CDC12	P32468	407 aa	Known RBP	5.38	□□□□□ -1.55
CMR3	YPR013C	PRP19	P32523	503 aa	Known RBP	5.38	□□□□□ -1.55
CMR3	YPR013C	REC104	P33323	182 aa		5.38	□□□□□ -1.55
CMR3	YPR013C	STO1	P34160	861 aa	Known RBP	5.38	□□□□□ -1.55
CMR3	YPR013C	MTC2	P34246	357 aa		5.38	□□□□□ -1.55
CMR3	YPR013C	BOI2	P39969	1040 aa		5.38	□□□□□ -1.55
CMR3	YPR013C	YGR021W	P53212	290 aa		5.38	□□□□□ -1.55
CMR3	YPR013C	YGR045C	P53229	120 aa		5.38	□□□□□ -1.55
CMR3	YPR013C	CUZ1	P53899	274 aa		5.38	□□□□□ -1.55
CMR3	YPR013C	BUL2	Q03758	920 aa	Known RBP	5.38	□□□□□ -1.55
CMR3	YPR013C	TMA64	Q04600	565 aa	Known RBP	5.38	□□□□□ -1.55
CMR3	YPR013C	YMR074C	Q04773	145 aa		5.38	□□□□□ -1.55
CMR3	YPR013C	NKP1	Q12493	238 aa		5.38	□□□□□ -1.55
CMR3	YPR013C	YDR461C-A	Q2V2P7	80 aa		5.38	□□□□□ -1.55
CMR3	YPR013C	MPD2	Q99316	277 aa		5.38	□□□□□ -1.55
CMR3	YPR013C	KIP1	P28742	1111 aa		5.37	□□□□□ -1.55
CMR3	YPR013C	TRZ1	P36159	838 aa	Predicted RBP	5.37	□□□□□ -1.55
CMR3	YPR013C	CKB2	P38930	258 aa		5.37	□□□□□ -1.55
CMR3	YPR013C	POL5	P39985	1022 aa	Known RBP	5.37	□□□□□ -1.55
CMR3	YPR013C	TOK1	P40310	691 aa		5.37	□□□□□ -1.55
CMR3	YPR013C	CAF16	P43569	289 aa		5.37	□□□□□ -1.55
CMR3	YPR013C	DUG1	P43616	481 aa	Known RBP	5.37	□□□□□ -1.55
CMR3	YPR013C	YJR096W	P47137	282 aa		5.37	□□□□□ -1.55
CMR3	YPR013C	CCM1	P48237	864 aa	Predicted RBP	5.37	□□□□□ -1.55
CMR3	YPR013C	DAM1	P53267	343 aa		5.37	□□□□□ -1.55
CMR3	YPR013C	YGR283C	P53336	341 aa	Predicted RBP	5.37	□□□□□ -1.55
CMR3	YPR013C	RSA3	Q05942	220 aa	Known RBP	5.37	□□□□□ -1.55
CMR3	YPR013C	GUD1	Q07729	489 aa		5.37	□□□□□ -1.55
CMR3	YPR013C	YTM1	Q12024	460 aa	Predicted RBP	5.37	□□□□□ -1.55
CMR3	YPR013C	SLP1	Q12232	587 aa		5.37	□□□□□ -1.55
CMR3	YPR013C	GIN4	Q12263	1142 aa		5.37	□□□□□ -1.55
CMR3	YPR013C	AFR1	P33304	620 aa		5.36	□□□□□ -1.55
CMR3	YPR013C	TFC4	P33339	1025 aa		5.36	□□□□□ -1.55
CMR3	YPR013C	MXR1	P40029	184 aa		5.36	□□□□□ -1.55
CMR3	YPR013C	GYP8	P43570	497 aa		5.36	□□□□□ -1.55
CMR3	YPR013C	YNL034W	P53963	612 aa		5.36	□□□□□ -1.55
CMR3	YPR013C	YNL018C	P53976	612 aa		5.36	□□□□□ -1.55
CMR3	YPR013C	ATP25	Q03153	612 aa		5.36	□□□□□ -1.55
CMR3	YPR013C	ELG1	Q12050	791 aa		5.36	□□□□□ -1.55
CMR3	YPR013C	PIF1	P07271	859 aa		5.35	□□□□□ -1.55
CMR3	YPR013C	SAC7	P17121	654 aa		5.35	□□□□□ -1.55
CMR3	YPR013C	AEP2	P22136	580 aa		5.35	□□□□□ -1.55
CMR3	YPR013C	EMC3	P36039	253 aa		5.35	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms