RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C GEM1P39722 662 aa2.57□□□□□ -2
NIP100YPL174C ZRG8P40021 1076 aa2.57□□□□□ -2
NIP100YPL174C MPH1P40562 993 aa2.57□□□□□ -2
NIP100YPL174C DUS3Q06053 668 aaKnown RBP2.57□□□□□ -2
NIP100YPL174C RPL11BQ3E757 174 aaPredicted RBP2.57□□□□□ -2
NIP100YPL174C RPP2AP05319 106 aaKnown RBP2.56□□□□□ -2
NIP100YPL174C PRP6P19735 899 aaPredicted RBP2.56□□□□□ -2
NIP100YPL174C POA1P38218 177 aa2.56□□□□□ -2
NIP100YPL174C HXT13P39924 564 aa2.56□□□□□ -2
NIP100YPL174C GNP1P48813 663 aa2.56□□□□□ -2
NIP100YPL174C HXT17P53631 564 aa2.56□□□□□ -2
NIP100YPL174C HXT15P54854 567 aa2.56□□□□□ -2
NIP100YPL174C GCN5Q03330 439 aa2.56□□□□□ -2
NIP100YPL174C YDR306CQ06640 478 aa2.56□□□□□ -2
NIP100YPL174C GPB1Q08886 897 aa2.56□□□□□ -2
NIP100YPL174C WRS1Q12109 432 aaKnown RBP2.56□□□□□ -2
NIP100YPL174C SOD2P00447 233 aa2.56□□□□□ -2
NIP100YPL174C BI4P03879 638 aa2.56□□□□□ -2
NIP100YPL174C AAR2P32357 355 aaPredicted RBP2.56□□□□□ -2
NIP100YPL174C MPT5P39016 859 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
NIP100YPL174C VPS30Q02948 557 aa2.56□□□□□ -2
NIP100YPL174C TMA10Q06177 86 aa2.56□□□□□ -2
NIP100YPL174C MEF2P39677 819 aa2.55□□□□□ -2
NIP100YPL174C ALD6P54115 500 aaKnown RBP2.55□□□□□ -2
NIP100YPL174C TDA5Q06417 326 aaKnown RBP2.55□□□□□ -2
NIP100YPL174C SCT1P32784 759 aa2.55□□□□□ -2
NIP100YPL174C SRP101P32916 621 aa2.55□□□□□ -2
NIP100YPL174C CCC2P38995 1004 aa2.55□□□□□ -2
NIP100YPL174C MET10P39692 1035 aa2.55□□□□□ -2
NIP100YPL174C EEB1Q02891 456 aa2.55□□□□□ -2
NIP100YPL174C BAP2P38084 609 aa2.55□□□□□ -2
NIP100YPL174C MCM6P53091 1017 aaKnown RBP2.55□□□□□ -2
NIP100YPL174C ESC2Q06340 456 aa2.55□□□□□ -2
NIP100YPL174C ACK1Q07622 623 aaPredicted RBP2.55□□□□□ -2
NIP100YPL174C MBP1P39678 833 aa2.54□□□□□ -2
NIP100YPL174C RRT14P40470 206 aa2.54□□□□□ -2
NIP100YPL174C GCV2P49095 1034 aa2.54□□□□□ -2
NIP100YPL174C SBA1P28707 216 aaKnown RBP2.54□□□□□ -2
NIP100YPL174C FLR1P38124 548 aa2.54□□□□□ -2
NIP100YPL174C PNT1P38969 423 aa2.54□□□□□ -2
NIP100YPL174C VPS16Q03308 798 aa2.54□□□□□ -2
NIP100YPL174C ACE2P21192 770 aa2.53□□□□□ -2
NIP100YPL174C RFA1P22336 621 aaKnown RBP2.53□□□□□ -2
NIP100YPL174C SHM2P37291 469 aaKnown RBP2.53□□□□□ -2
NIP100YPL174C YRO2P38079 344 aa2.53□□□□□ -2
NIP100YPL174C HFM1P51979 1187 aa2.53□□□□□ -2
NIP100YPL174C ADE8P04161 214 aa2.53□□□□□ -2.01
NIP100YPL174C CAD1P24813 409 aaKnown RBP2.53□□□□□ -2.01
NIP100YPL174C EMC1P25574 760 aa2.53□□□□□ -2.01
NIP100YPL174C DUT1P33317 147 aa2.53□□□□□ -2.01
NIP100YPL174C TSA1P34760 196 aaKnown RBP2.53□□□□□ -2.01
NIP100YPL174C MRP8P35719 219 aa2.53□□□□□ -2.01
NIP100YPL174C CLU1Q03690 1277 aaKnown RBP2.53□□□□□ -2.01
NIP100YPL174C YAP6Q03935 383 aa2.53□□□□□ -2.01
NIP100YPL174C OPI10Q08202 246 aa2.53□□□□□ -2.01
NIP100YPL174C PIN2Q12057 282 aa2.53□□□□□ -2.01
NIP100YPL174C TUB2P02557 457 aaKnown RBP2.52□□□□□ -2.01
NIP100YPL174C HSF1P10961 833 aa2.52□□□□□ -2.01
NIP100YPL174C PRP9P19736 530 aaKnown RBP2.52□□□□□ -2.01
NIP100YPL174C YCR015CP25616 317 aa2.52□□□□□ -2.01
NIP100YPL174C SLA2P33338 968 aa2.52□□□□□ -2.01
NIP100YPL174C URN1Q06525 465 aaKnown RBP2.52□□□□□ -2.01
NIP100YPL174C TPO1Q07824 586 aa2.52□□□□□ -2.01
NIP100YPL174C RPS9AO13516 197 aaKnown RBP2.52□□□□□ -2.01
NIP100YPL174C DBP2P24783 546 aaKnown RBP2.52□□□□□ -2.01
NIP100YPL174C VBA5P36172 582 aa2.52□□□□□ -2.01
NIP100YPL174C PLB2Q03674 706 aa2.52□□□□□ -2.01
NIP100YPL174C OSH2Q12451 1283 aa2.52□□□□□ -2.01
NIP100YPL174C AGP1P25376 633 aa2.51□□□□□ -2.01
NIP100YPL174C TAT2P38967 592 aa2.51□□□□□ -2.01
NIP100YPL174C YGR012WP53206 393 aa2.51□□□□□ -2.01
NIP100YPL174C HRQ1Q05549 1077 aa2.51□□□□□ -2.01
NIP100YPL174C YLR224WQ05947 369 aa2.51□□□□□ -2.01
NIP100YPL174C ATG13Q06628 738 aa2.51□□□□□ -2.01
NIP100YPL174C YPL066WQ12194 479 aa2.51□□□□□ -2.01
NIP100YPL174C HCM1P25364 564 aa2.51□□□□□ -2.01
NIP100YPL174C CTS1P29029 562 aa2.51□□□□□ -2.01
NIP100YPL174C FUN30P31380 1131 aa2.51□□□□□ -2.01
NIP100YPL174C ABZ1P37254 787 aaPredicted RBP2.51□□□□□ -2.01
NIP100YPL174C YER158CP40095 573 aa2.51□□□□□ -2.01
NIP100YPL174C PUS2P53167 370 aa2.51□□□□□ -2.01
NIP100YPL174C XYL2Q07993 356 aa2.51□□□□□ -2.01
NIP100YPL174C MDM38Q08179 573 aa2.51□□□□□ -2.01
NIP100YPL174C PRE10P21242 288 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
NIP100YPL174C CDC11P32458 415 aa2.5□□□□□ -2.01
NIP100YPL174C MND2P40577 368 aa2.5□□□□□ -2.01
NIP100YPL174C TAF1P46677 1066 aa2.5□□□□□ -2.01
NIP100YPL174C MNN10P50108 393 aaKnown RBP2.5□□□□□ -2.01
NIP100YPL174C SPO75Q07798 868 aa2.5□□□□□ -2.01
NIP100YPL174C ARE1P25628 610 aa2.5□□□□□ -2.01
NIP100YPL174C CDC20P26309 610 aa2.5□□□□□ -2.01
NIP100YPL174C PBY1P38254 753 aa2.5□□□□□ -2.01
NIP100YPL174C ALR2P43553 858 aa2.5□□□□□ -2.01
NIP100YPL174C IOC3P43596 787 aa2.5□□□□□ -2.01
NIP100YPL174C NAN1Q02931 896 aaKnown RBP2.5□□□□□ -2.01
NIP100YPL174C MSC2Q03455 724 aa2.5□□□□□ -2.01
NIP100YPL174C GSF2Q04697 403 aaKnown RBP2.5□□□□□ -2.01
NIP100YPL174C SIP5P40210 489 aaKnown RBP2.49□□□□□ -2.01
NIP100YPL174C YGR053CP53234 283 aa2.49□□□□□ -2.01
NIP100YPL174C SRT1Q03175 343 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms