RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	MCM7	P38132	845 aa		4.98	□□□□□ -1.61
CAF20	YOR276W	PBY1	P38254	753 aa		4.98	□□□□□ -1.61
CAF20	YOR276W	MBP1	P39678	833 aa		4.98	□□□□□ -1.61
CAF20	YOR276W	SSB2	P40150	613 aa	Known RBP	4.98	□□□□□ -1.61
CAF20	YOR276W	HUL4	P40985	892 aa		4.98	□□□□□ -1.61
CAF20	YOR276W	ALR2	P43553	858 aa		4.98	□□□□□ -1.61
CAF20	YOR276W	YGL176C	P46945	554 aa		4.98	□□□□□ -1.61
CAF20	YOR276W	ENT3	P47160	408 aa		4.98	□□□□□ -1.61
CAF20	YOR276W	YLR257W	Q06146	321 aa	Known RBP	4.98	□□□□□ -1.61
CAF20	YOR276W	ESC8	Q08119	714 aa		4.98	□□□□□ -1.61
CAF20	YOR276W	SAM35	P14693	329 aa		4.97	□□□□□ -1.61
CAF20	YOR276W	SRM1	P21827	482 aa		4.97	□□□□□ -1.61
CAF20	YOR276W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
CAF20	YOR276W	YKL107W	P34251	309 aa		4.97	□□□□□ -1.61
CAF20	YOR276W	ADD66	P36040	267 aa		4.97	□□□□□ -1.61
CAF20	YOR276W	GTS1	P40956	396 aa		4.97	□□□□□ -1.61
CAF20	YOR276W	RTA1	P53047	317 aa		4.97	□□□□□ -1.61
CAF20	YOR276W	YNR063W	P53749	607 aa		4.97	□□□□□ -1.61
CAF20	YOR276W	DNM1	P54861	757 aa		4.97	□□□□□ -1.61
CAF20	YOR276W	TAF8	Q03750	510 aa		4.97	□□□□□ -1.61
CAF20	YOR276W	YPL066W	Q12194	479 aa		4.97	□□□□□ -1.61
CAF20	YOR276W	PRP6	P19735	899 aa	Predicted RBP	4.96	□□□□□ -1.62
CAF20	YOR276W	YKL222C	P35995	705 aa		4.96	□□□□□ -1.62
CAF20	YOR276W	ATG14	P38270	344 aa		4.96	□□□□□ -1.62
CAF20	YOR276W	HSE1	P38753	452 aa		4.96	□□□□□ -1.62
CAF20	YOR276W	ATG36	P46983	293 aa		4.96	□□□□□ -1.62
CAF20	YOR276W	RSA3	Q05942	220 aa	Known RBP	4.96	□□□□□ -1.62
CAF20	YOR276W	HRK1	Q08732	759 aa	Known RBP	4.96	□□□□□ -1.62
CAF20	YOR276W	YDL177C	Q12257	170 aa		4.96	□□□□□ -1.62
CAF20	YOR276W	RKM4	Q12504	494 aa		4.96	□□□□□ -1.62
CAF20	YOR276W	NOP14	Q99207	810 aa	Known RBP	4.96	□□□□□ -1.62
CAF20	YOR276W	ADR1	P07248	1323 aa		4.96	□□□□□ -1.62
CAF20	YOR276W	PRP9	P19736	530 aa	Known RBP	4.95	□□□□□ -1.62
CAF20	YOR276W	DBP5	P20449	482 aa	Known RBP	4.95	□□□□□ -1.62
CAF20	YOR276W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
CAF20	YOR276W	BET3	P36149	193 aa		4.95	□□□□□ -1.62
CAF20	YOR276W	YHL012W	P38709	493 aa		4.95	□□□□□ -1.62
CAF20	YOR276W	CRP1	P38845	465 aa	Known RBP	4.95	□□□□□ -1.62
CAF20	YOR276W	YEN1	P40028	759 aa		4.95	□□□□□ -1.62
CAF20	YOR276W	CNN1	P43618	361 aa		4.95	□□□□□ -1.62
CAF20	YOR276W	YGL081W	P53156	320 aa		4.95	□□□□□ -1.62
CAF20	YOR276W	UTP8	P53276	713 aa	Known RBP	4.95	□□□□□ -1.62
CAF20	YOR276W	RTS3	P53289	263 aa		4.95	□□□□□ -1.62
CAF20	YOR276W	YDL124W	Q07551	312 aa	Known RBP	4.95	□□□□□ -1.62
CAF20	YOR276W	NTG2	Q08214	380 aa		4.95	□□□□□ -1.62
CAF20	YOR276W	LAP2	Q10740	671 aa		4.95	□□□□□ -1.62
CAF20	YOR276W	MDL2	P33311	773 aa		4.94	□□□□□ -1.62
CAF20	YOR276W	NMD3	P38861	518 aa	Known RBP	4.94	□□□□□ -1.62
CAF20	YOR276W	UBP12	P39538	1254 aa		4.94	□□□□□ -1.62
CAF20	YOR276W	TAF1	P46677	1066 aa		4.94	□□□□□ -1.62
CAF20	YOR276W	MRPL22	P53881	309 aa		4.94	□□□□□ -1.62
CAF20	YOR276W	MSH2	P25847	964 aa		4.93	□□□□□ -1.62
CAF20	YOR276W	AFG2	P32794	780 aa		4.93	□□□□□ -1.62
CAF20	YOR276W	ALG3	P38179	458 aa		4.93	□□□□□ -1.62
CAF20	YOR276W	CCC2	P38995	1004 aa		4.93	□□□□□ -1.62
CAF20	YOR276W	HSV2	P50079	448 aa	Predicted RBP	4.93	□□□□□ -1.62
CAF20	YOR276W	RKM2	Q03942	479 aa		4.93	□□□□□ -1.62
CAF20	YOR276W	SRO9	P25567	434 aa	Known RBP	4.92	□□□□□ -1.62
CAF20	YOR276W	MLS1	P30952	554 aa		4.92	□□□□□ -1.62
CAF20	YOR276W	SFP1	P32432	683 aa		4.92	□□□□□ -1.62
CAF20	YOR276W	AIM3	P38266	947 aa	Known RBP	4.92	□□□□□ -1.62
CAF20	YOR276W	ETP1	P38748	585 aa	Known RBP	4.92	□□□□□ -1.62
CAF20	YOR276W	SNF7	P39929	240 aa	Known RBP	4.92	□□□□□ -1.62
CAF20	YOR276W	MPH1	P40562	993 aa		4.92	□□□□□ -1.62
CAF20	YOR276W	YJL045W	P47052	634 aa		4.92	□□□□□ -1.62
CAF20	YOR276W	RPL8A	P17076	256 aa	Known RBP	4.91	□□□□□ -1.62
CAF20	YOR276W	FLR1	P38124	548 aa		4.91	□□□□□ -1.62
CAF20	YOR276W	YBR284W	P38150	797 aa		4.91	□□□□□ -1.62
CAF20	YOR276W	QNS1	P38795	714 aa	Known RBP	4.91	□□□□□ -1.62
CAF20	YOR276W	GIP4	P39732	760 aa		4.91	□□□□□ -1.62
CAF20	YOR276W	HNT2	P49775	206 aa		4.91	□□□□□ -1.62
CAF20	YOR276W	ZDS1	P50111	915 aa	Known RBP	4.91	□□□□□ -1.62
CAF20	YOR276W	RIM8	P53179	542 aa		4.91	□□□□□ -1.62
CAF20	YOR276W	YNR029C	P53729	429 aa	Known RBP	4.91	□□□□□ -1.62
CAF20	YOR276W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
CAF20	YOR276W	PTC5	Q12511	572 aa		4.91	□□□□□ -1.62
CAF20	YOR276W	HBN1	Q96VH4	193 aa		4.91	□□□□□ -1.62
CAF20	YOR276W	TOM70	P07213	617 aa	Known RBP	4.9	□□□□□ -1.63
CAF20	YOR276W	TOP3	P13099	656 aa		4.9	□□□□□ -1.63
CAF20	YOR276W	HBS1	P32769	611 aa	Known RBP	4.9	□□□□□ -1.63
CAF20	YOR276W	SIP5	P40210	489 aa	Known RBP	4.9	□□□□□ -1.63
CAF20	YOR276W	VPS53	P47061	822 aa		4.9	□□□□□ -1.63
CAF20	YOR276W	FOL2	P51601	243 aa	Known RBP	4.9	□□□□□ -1.63
CAF20	YOR276W	TFB2	Q02939	513 aa		4.9	□□□□□ -1.63
CAF20	YOR276W	YDR306C	Q06640	478 aa		4.9	□□□□□ -1.63
CAF20	YOR276W	SOD2	P00447	233 aa		4.89	□□□□□ -1.63
CAF20	YOR276W	RGD1	P38339	666 aa		4.89	□□□□□ -1.63
CAF20	YOR276W	GDH3	P39708	457 aa		4.89	□□□□□ -1.63
CAF20	YOR276W	MAL11	P53048	616 aa		4.89	□□□□□ -1.63
CAF20	YOR276W	UGO1	Q03327	502 aa		4.89	□□□□□ -1.63
CAF20	YOR276W	TOP1	P04786	769 aa		4.88	□□□□□ -1.63
CAF20	YOR276W	CDC11	P32458	415 aa		4.88	□□□□□ -1.63
CAF20	YOR276W	YSC84	P32793	468 aa		4.88	□□□□□ -1.63
CAF20	YOR276W	AIM26	P32858	118 aa		4.88	□□□□□ -1.63
CAF20	YOR276W	PEX6	P33760	1030 aa		4.88	□□□□□ -1.63
CAF20	YOR276W	GEM1	P39722	662 aa		4.88	□□□□□ -1.63
CAF20	YOR276W	HLJ1	P48353	224 aa		4.88	□□□□□ -1.63
CAF20	YOR276W	SNO2	P53823	222 aa		4.88	□□□□□ -1.63
CAF20	YOR276W	SPP382	Q06411	708 aa	Predicted RBP	4.88	□□□□□ -1.63
CAF20	YOR276W	ATG13	Q06628	738 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms